RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
CTDSPL-201ENST00000273179 KRTAP27-1Q3LI81 207 aa6.47□□□□□ -1.37
CTDSPL-201ENST00000273179 Q75L30 129 aa6.47□□□□□ -1.37
CTDSPL-201ENST00000273179 ZNF71Q9NQZ8 489 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL-201ENST00000273179 SRRM5B3KS81 715 aa6.46□□□□□ -1.37
CTDSPL-201ENST00000273179 Q6ZS46 218 aa6.46□□□□□ -1.37
CTDSPL-201ENST00000273179 ABCA4P78363 2273 aa6.46□□□□□ -1.38
CTDSPL-201ENST00000273179 A0A096LNJ9 63 aa6.46□□□□□ -1.38
CTDSPL-201ENST00000273179 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
CTDSPL-201ENST00000273179 GAFA1Q96PS6 74 aa6.46□□□□□ -1.38
CTDSPL-201ENST00000273179 COL12A1Q99715 3063 aa6.46□□□□□ -1.38
CTDSPL-201ENST00000273179 SPTA1P02549 2419 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 IGHV1-18A0A0C4DH31 117 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 C16orf90A8MZG2 172 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 FSHBP01225 129 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 ZNF292O60281 2723 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 IGHV1-69P01742 117 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 ZNRF1Q8ND25 227 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 CEP295Q9C0D2 2601 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 ZZEF1O43149 2961 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 OTOGLQ3ZCN5 2332 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 BSNQ9UPA5 3926 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 IGKV3-15P01624 115 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 PLA2G2CQ5R387 149 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 Q86TA4 180 aa6.45□□□□□ -1.38
CTDSPL-201ENST00000273179 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 SPAG11BQ08648 103 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 SPAG11AQ6PDA7 123 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 APC2O95996 2303 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 LYZP61626 148 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 SHANK1Q9Y566 2161 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 ZNF503-AS2A6NEH8 195 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 RPL39P5Q59GN2 51 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 PIP4P2Q8N4L2 257 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 SVEP1Q4LDE5 3571 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 PCSK5Q92824 1860 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 CHCHD10Q8WYQ3 142 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 ICE1Q9Y2F5 2266 aa6.44□□□□□ -1.38
CTDSPL-201ENST00000273179 ARFGEF3Q5TH69 2177 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 IGKV1-6A0A0C4DH72 117 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 BPY2O14599 106 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 Q8N3U1 123 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 TMEM14CQ9P0S9 112 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 NCR3O14931 201 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 TRGV3P03979 118 aa6.43□□□□□ -1.38
CTDSPL-201ENST00000273179 COL5A1P20908 1838 aaPredicted RBP6.42□□□□□ -1.38
CTDSPL-201ENST00000273179 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
CTDSPL-201ENST00000273179 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CTDSPL-201ENST00000273179 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
CTDSPL-201ENST00000273179 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 H0YGX0 51 aa6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 NDUFB1O75438 58 aa6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 LEAP2Q969E1 77 aa6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 MUC6Q6W4X9 2439 aa6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 SAA2P0DJI9 122 aaPredicted RBP6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 RPL36AP83881 106 aaKnown RBP6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 TNRC6BQ9UPQ9 1833 aaKnown RBP6.41□□□□□ -1.38
CTDSPL-201ENST00000273179 PRCDQ00LT1 54 aa6.4□□□□□ -1.38
CTDSPL-201ENST00000273179 MIAQ16674 131 aa6.4□□□□□ -1.38
CTDSPL-201ENST00000273179 ANKRD11Q6UB99 2663 aaPredicted RBP6.4□□□□□ -1.38
CTDSPL-201ENST00000273179 LECT2O14960 151 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 FBXL19-AS1Q494R0 122 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 FSTL3O95633 263 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 IGHV1-46P01743 117 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 DEFB112Q30KQ8 113 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 Q6ZRP5 223 aa6.4□□□□□ -1.39
CTDSPL-201ENST00000273179 TRBV10-1A0A0K0K1A3 114 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 MRPL36Q9P0J6 103 aaKnown RBP6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 PTPRBP23467 1997 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 IGLV1-44P01699 117 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 CRIP3Q6Q6R5 217 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 NBASA2RRP1 2371 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 ROS1P08922 2347 aa6.39□□□□□ -1.39
CTDSPL-201ENST00000273179 CMC4P56277 68 aaPredicted RBP6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 CSMD1Q96PZ7 3565 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 CLPSL1A2RUU4 121 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 ATP6V0E1O15342 81 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
CTDSPL-201ENST00000273179 B9D2Q9BPU9 175 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 TRAV10A0A0B4J240 114 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 A6NN06 94 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 IGKV1-39P01597 117 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 IGKV1D-39P04432 117 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 TACC2O95359 2948 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 IGHV7-4-1A0A0J9YVY3 117 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 HCP5Q6MZN7 132 aa6.37□□□□□ -1.39
CTDSPL-201ENST00000273179 ACACAQ13085 2346 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms