RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 LINC00467Q9BRT7 94 aa12.52□□□□□ -0.41
LRRC56-201ENST00000270115 NDUFA1O15239 70 aa12.52□□□□□ -0.41
LRRC56-201ENST00000270115 CHCHD7Q9BUK0 85 aa12.52□□□□□ -0.41
LRRC56-201ENST00000270115 ATP5G1P05496 136 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 COX6A2Q02221 97 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 PRORYQ9H606 182 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 SPG11Q96JI7 2443 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
LRRC56-201ENST00000270115 CXCL5P42830 114 aa12.5□□□□□ -0.41
LRRC56-201ENST00000270115 Q6ZSN1 163 aa12.5□□□□□ -0.41
LRRC56-201ENST00000270115 USMG5Q96IX5 58 aa12.5□□□□□ -0.41
LRRC56-201ENST00000270115 UTP20O75691 2785 aaKnown RBP12.49□□□□□ -0.41
LRRC56-201ENST00000270115 IGKV3D-7A0A0C4DH55 119 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 A0A1B0GX51 115 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 CRYGAP11844 174 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 BLCAPP62952 87 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 CSMD2Q7Z408 3487 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 FLNCQ14315 2725 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
LRRC56-201ENST00000270115 GNLYP22749 145 aa12.48□□□□□ -0.41
LRRC56-201ENST00000270115 TRACP01848 142 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 ATOX1O00244 68 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 DGAT2L7PQ6IED9 249 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
LRRC56-201ENST00000270115 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
LRRC56-201ENST00000270115 A0A087WVE0 104 aa12.46□□□□□ -0.42
LRRC56-201ENST00000270115 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.42
LRRC56-201ENST00000270115 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.42
LRRC56-201ENST00000270115 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.42
LRRC56-201ENST00000270115 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.42
LRRC56-201ENST00000270115 C9orf129Q5T035 196 aaKnown RBP12.46□□□□□ -0.42
LRRC56-201ENST00000270115 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
LRRC56-201ENST00000270115 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
LRRC56-201ENST00000270115 MALP21145 153 aa12.45□□□□□ -0.42
LRRC56-201ENST00000270115 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
LRRC56-201ENST00000270115 HIST1H4AP62805 103 aaKnown RBP12.44□□□□□ -0.42
LRRC56-201ENST00000270115 C14orf132Q9NPU4 83 aa12.44□□□□□ -0.42
LRRC56-201ENST00000270115 USP24Q9UPU5 2620 aa12.44□□□□□ -0.42
LRRC56-201ENST00000270115 LMO4P61968 165 aa12.44□□□□□ -0.42
LRRC56-201ENST00000270115 DSCR8Q96T75 97 aa12.44□□□□□ -0.42
LRRC56-201ENST00000270115 DNAL4O96015 105 aa12.43□□□□□ -0.42
LRRC56-201ENST00000270115 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
LRRC56-201ENST00000270115 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
LRRC56-201ENST00000270115 RPL18AQ02543 176 aaKnown RBP12.42□□□□□ -0.42
LRRC56-201ENST00000270115 IGHV3OR16-12A0A075B7B8 117 aa12.42□□□□□ -0.42
LRRC56-201ENST00000270115 H3BUX3 64 aa12.42□□□□□ -0.42
LRRC56-201ENST00000270115 C19orf84I3L1E1 186 aa12.42□□□□□ -0.42
LRRC56-201ENST00000270115 RPS28P62857 69 aaKnown RBP12.41□□□□□ -0.42
LRRC56-201ENST00000270115 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
LRRC56-201ENST00000270115 PRB1P04280 392 aa12.41□□□□□ -0.42
LRRC56-201ENST00000270115 LINC00242Q5T6M2 205 aa12.41□□□□□ -0.42
LRRC56-201ENST00000270115 USP9XQ93008 2570 aaPredicted RBP12.4□□□□□ -0.42
LRRC56-201ENST00000270115 OXTP01178 125 aa12.4□□□□□ -0.42
LRRC56-201ENST00000270115 IGLV5-45A0A087WSX0 123 aa12.4□□□□□ -0.43
LRRC56-201ENST00000270115 K7EMT4 169 aa12.4□□□□□ -0.43
LRRC56-201ENST00000270115 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.43
LRRC56-201ENST00000270115 PIMREGQ9BSJ6 248 aa12.4□□□□□ -0.43
LRRC56-201ENST00000270115 K7EQG2 157 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 C4orf26Q17RF5 130 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 C10orf99Q6UWK7 81 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 RNF152Q8N8N0 203 aa12.39□□□□□ -0.43
LRRC56-201ENST00000270115 A0A087WYN8 130 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 SMIM1B2RUZ4 78 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 H3BUA1 57 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 HIST2H2BCQ6DN03 193 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 HIST2H2BDQ6DRA6 164 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 CELSR2Q9HCU4 2923 aa12.38□□□□□ -0.43
LRRC56-201ENST00000270115 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 ZNF462Q96JM2 2506 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 SERP2Q8N6R1 65 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 ABCA2Q9BZC7 2435 aa12.37□□□□□ -0.43
LRRC56-201ENST00000270115 CENPEQ02224 2701 aa12.36□□□□□ -0.43
LRRC56-201ENST00000270115 C2CD3Q4AC94 2353 aa12.36□□□□□ -0.43
LRRC56-201ENST00000270115 TMEM258P61165 79 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 LINC01561Q8N1V8 128 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 CUBNO60494 3623 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 WIPF1O43516 503 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 CRPP02741 224 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 LINC00337Q8N6G1 96 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 UPK3BQ9BT76 320 aa12.35□□□□□ -0.43
LRRC56-201ENST00000270115 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
LRRC56-201ENST00000270115 NCR3O14931 201 aa12.34□□□□□ -0.43
LRRC56-201ENST00000270115 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
LRRC56-201ENST00000270115 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
LRRC56-201ENST00000270115 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
LRRC56-201ENST00000270115 SLPIP03973 132 aa12.32□□□□□ -0.44
LRRC56-201ENST00000270115 CFHR3Q02985 330 aa12.32□□□□□ -0.44
LRRC56-201ENST00000270115 Q6JHZ5 121 aa12.32□□□□□ -0.44
LRRC56-201ENST00000270115 TRAV13-2A0A0B4J235 113 aa12.31□□□□□ -0.44
LRRC56-201ENST00000270115 A6NDX4 124 aa12.31□□□□□ -0.44
LRRC56-201ENST00000270115 SMIM11BQ8TCY0 68 aa12.31□□□□□ -0.44
LRRC56-201ENST00000270115 MIR7-3HGQ8N6C7 128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms