RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 FBN2P35556 2912 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 RPL11P62913 178 aaKnown RBP6.47□□□□□ -1.37
VAPB-201ENST00000265619 F6UB75 175 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 IL17DQ8TAD2 202 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 TMEM190Q8WZ59 177 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 FAM218AQ96MZ4 157 aa6.47□□□□□ -1.37
VAPB-201ENST00000265619 IGHV4-61A0A0C4DH41 118 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 SDHAF1A6NFY7 115 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 FHL2Q14192 279 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 C11orf71Q6IPW1 123 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 ZFAND2AQ8N6M9 145 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 FAM104AQ969W3 186 aa6.46□□□□□ -1.37
VAPB-201ENST00000265619 IGHV4-30-2A0A087WSY4 118 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 KRTAP10-9P60411 292 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 TIMM17AQ99595 171 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 IGHV1-69DA0A0B4J2H0 117 aa6.46□□□□□ -1.38
VAPB-201ENST00000265619 APCP25054 2843 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 COX6CP09669 75 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 DGAT2L7PQ6IED9 249 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 BEAN1Q3B7T3 259 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 TMEM141Q96I45 108 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 DPM3Q9P2X0 92 aa6.45□□□□□ -1.38
VAPB-201ENST00000265619 RNASE4P34096 147 aaKnown RBP6.44□□□□□ -1.38
VAPB-201ENST00000265619 FAM223AQ8IWN6 122 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 Q9HAA7 133 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 FAM74A4Q5TZK3 123 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 NF1P21359 2839 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 AVPP01185 164 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 ACYP1P07311 99 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 TMEM258P61165 79 aa6.44□□□□□ -1.38
VAPB-201ENST00000265619 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
VAPB-201ENST00000265619 LY6LH3BQJ8 138 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 SAA4P35542 130 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
VAPB-201ENST00000265619 MIAQ16674 131 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 IGLV4-3A0A075B6K6 122 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 A0A0J9YX75 114 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 FAM223BA6NKX1 122 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 ATOX1O00244 68 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
VAPB-201ENST00000265619 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 CXCL5P42830 114 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 HILS1P60008 231 aa6.43□□□□□ -1.38
VAPB-201ENST00000265619 UBR5O95071 2799 aaPredicted RBP6.43□□□□□ -1.38
VAPB-201ENST00000265619 ATP5G1P05496 136 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 BAALC-AS2P0C853 105 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 IGHV4OR15-8A0A075B7B6 117 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 A0A087WW49 117 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 VCYO14598 125 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 C15orf32Q32M92 178 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
VAPB-201ENST00000265619 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
VAPB-201ENST00000265619 FN1P02751 2386 aaKnown RBP6.42□□□□□ -1.38
VAPB-201ENST00000265619 PFN2P35080 140 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 CLEC19AQ6UXS0 136 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 C16orf92Q96LL3 132 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 IGHV4-38-2P0DP08 117 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 C9orf139Q6ZV77 190 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 Q9UF83 564 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 UNC79Q9P2D8 2635 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 LMO4P61968 165 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
VAPB-201ENST00000265619 HIVEP2P31629 2446 aa6.4□□□□□ -1.38
VAPB-201ENST00000265619 MXRA5Q9NR99 2828 aa6.4□□□□□ -1.38
VAPB-201ENST00000265619 A0A0U1RQV1 116 aa6.4□□□□□ -1.38
VAPB-201ENST00000265619 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
VAPB-201ENST00000265619 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.38
VAPB-201ENST00000265619 IGHG2P01859 326 aa6.4□□□□□ -1.39
VAPB-201ENST00000265619 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 TMEM86BQ8N661 226 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 C11orf44Q8N8P7 122 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 KLK9Q9UKQ9 250 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 TEP1Q99973 2627 aaKnown RBP6.39□□□□□ -1.39
VAPB-201ENST00000265619 TRAV21A0A0B4J279 112 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 G3V318 75 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 COX7A2LO14548 114 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 IGHV1-69P01742 117 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 SYNJ2BPP57105 145 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.39□□□□□ -1.39
VAPB-201ENST00000265619 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 WFDC11Q8NEX6 87 aa6.39□□□□□ -1.39
VAPB-201ENST00000265619 IGHV1-58A0A0C4DH39 117 aa6.38□□□□□ -1.39
VAPB-201ENST00000265619 IGKV3-20P01619 116 aa6.38□□□□□ -1.39
VAPB-201ENST00000265619 NPBQ8NG41 125 aa6.38□□□□□ -1.39
VAPB-201ENST00000265619 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
VAPB-201ENST00000265619 H3BUX3 64 aa6.38□□□□□ -1.39
VAPB-201ENST00000265619 HTN1P15515 57 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms