RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 CYSLTR1Q9Y271 337 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 M0R2N4 97 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 LINC00310P59036 64 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 MIAQ16674 131 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-201ENST00000265304 C1orf134Q5TEV5 83 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
SSBP1-201ENST00000265304 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 RTL8CO15255 209 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
SSBP1-201ENST00000265304 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
SSBP1-201ENST00000265304 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 TIMM17AQ99595 171 aa9.54□□□□□ -0.88
SSBP1-201ENST00000265304 CCL25O15444 150 aa9.53□□□□□ -0.88
SSBP1-201ENST00000265304 REG3AQ06141 175 aa9.53□□□□□ -0.88
SSBP1-201ENST00000265304 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
SSBP1-201ENST00000265304 ERASQ7Z444 233 aa9.53□□□□□ -0.88
SSBP1-201ENST00000265304 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
SSBP1-201ENST00000265304 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
SSBP1-201ENST00000265304 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
SSBP1-201ENST00000265304 UBE2WQ96B02 151 aa9.52□□□□□ -0.89
SSBP1-201ENST00000265304 AMELXQ99217 191 aa9.52□□□□□ -0.89
SSBP1-201ENST00000265304 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
SSBP1-201ENST00000265304 BAGE3Q86Y29 109 aa9.51□□□□□ -0.89
SSBP1-201ENST00000265304 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
SSBP1-201ENST00000265304 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
SSBP1-201ENST00000265304 HBDP02042 147 aa9.5□□□□□ -0.89
SSBP1-201ENST00000265304 Q6ZUT4 128 aa9.5□□□□□ -0.89
SSBP1-201ENST00000265304 RMI2Q96E14 147 aa9.5□□□□□ -0.89
SSBP1-201ENST00000265304 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 C1orf196B1AJZ1 125 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 SERF1AO75920 110 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 CRPP02741 224 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 PAPPA-AS1Q5QFB9 102 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 FAM19A3Q7Z5A8 133 aa9.49□□□□□ -0.89
SSBP1-201ENST00000265304 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
SSBP1-201ENST00000265304 NUPR1O60356 82 aa9.48□□□□□ -0.89
SSBP1-201ENST00000265304 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-201ENST00000265304 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
SSBP1-201ENST00000265304 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
SSBP1-201ENST00000265304 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
SSBP1-201ENST00000265304 Q9HAA7 133 aa9.47□□□□□ -0.89
SSBP1-201ENST00000265304 PKD1P98161 4303 aa9.46□□□□□ -0.89
SSBP1-201ENST00000265304 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
SSBP1-201ENST00000265304 HSBP1O75506 76 aa9.46□□□□□ -0.9
SSBP1-201ENST00000265304 ATP5LO75964 103 aa9.45□□□□□ -0.9
SSBP1-201ENST00000265304 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-201ENST00000265304 VCX2Q9H322 139 aa9.45□□□□□ -0.9
SSBP1-201ENST00000265304 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
SSBP1-201ENST00000265304 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-201ENST00000265304 UBE2D1P51668 147 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 SS18Q15532 418 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 Q6ZN92 141 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 TEX43Q6ZNM6 134 aa9.44□□□□□ -0.9
SSBP1-201ENST00000265304 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-201ENST00000265304 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
SSBP1-201ENST00000265304 FOXI1Q12951 378 aa9.43□□□□□ -0.9
SSBP1-201ENST00000265304 RNASE13Q5GAN3 156 aaKnown RBP9.43□□□□□ -0.9
SSBP1-201ENST00000265304 FAM19A2Q8N3H0 131 aa9.43□□□□□ -0.9
SSBP1-201ENST00000265304 BAALCQ8WXS3 180 aa9.43□□□□□ -0.9
SSBP1-201ENST00000265304 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
SSBP1-201ENST00000265304 A0A087WTM6 91 aa9.42□□□□□ -0.9
SSBP1-201ENST00000265304 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
SSBP1-201ENST00000265304 TNP2Q05952 138 aa9.42□□□□□ -0.9
SSBP1-201ENST00000265304 PMVKQ15126 192 aa9.42□□□□□ -0.9
SSBP1-201ENST00000265304 LINC00242Q5T6M2 205 aa9.42□□□□□ -0.9
SSBP1-201ENST00000265304 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
SSBP1-201ENST00000265304 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
SSBP1-201ENST00000265304 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
SSBP1-201ENST00000265304 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
SSBP1-201ENST00000265304 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
SSBP1-201ENST00000265304 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
SSBP1-201ENST00000265304 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
SSBP1-201ENST00000265304 LEPROTL1O95214 131 aa9.4□□□□□ -0.9
SSBP1-201ENST00000265304 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
SSBP1-201ENST00000265304 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
SSBP1-201ENST00000265304 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms