RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 H7C423 109 aa9.01□□□□□ -0.97
CHMP3-201ENST00000263856 COX6A2Q02221 97 aa9□□□□□ -0.97
CHMP3-201ENST00000263856 NF1P21359 2839 aa9□□□□□ -0.97
CHMP3-201ENST00000263856 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
CHMP3-201ENST00000263856 LINC01356Q8N9X3 169 aa9□□□□□ -0.97
CHMP3-201ENST00000263856 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
CHMP3-201ENST00000263856 PIEZO1Q92508 2521 aa8.99□□□□□ -0.97
CHMP3-201ENST00000263856 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
CHMP3-201ENST00000263856 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
CHMP3-201ENST00000263856 FN1P02751 2386 aaKnown RBP8.99□□□□□ -0.97
CHMP3-201ENST00000263856 IGSF10Q6WRI0 2623 aa8.99□□□□□ -0.97
CHMP3-201ENST00000263856 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
CHMP3-201ENST00000263856 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
CHMP3-201ENST00000263856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.99□□□□□ -0.97
CHMP3-201ENST00000263856 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 ZNF702PQ9H963 129 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 GAGE12JA6NER3 117 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 GAGE4Q13068 117 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 GAGE5Q13069 117 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 PRIMA1Q86XR5 153 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 MAP6D1Q9H9H5 199 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 TOMM7Q9P0U1 55 aa8.98□□□□□ -0.97
CHMP3-201ENST00000263856 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
CHMP3-201ENST00000263856 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
CHMP3-201ENST00000263856 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
CHMP3-201ENST00000263856 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
CHMP3-201ENST00000263856 YAE1D1Q9NRH1 226 aa8.97□□□□□ -0.97
CHMP3-201ENST00000263856 IFITM1P13164 125 aa8.97□□□□□ -0.97
CHMP3-201ENST00000263856 CITED1Q99966 193 aa8.96□□□□□ -0.97
CHMP3-201ENST00000263856 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.97
CHMP3-201ENST00000263856 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
CHMP3-201ENST00000263856 INSP01308 110 aa8.96□□□□□ -0.98
CHMP3-201ENST00000263856 NIPBLQ6KC79 2804 aaeCLIP8.96□□□□□ -0.98
CHMP3-201ENST00000263856 GAGE6Q13070 117 aa8.96□□□□□ -0.98
CHMP3-201ENST00000263856 PRORYQ9H606 182 aa8.96□□□□□ -0.98
CHMP3-201ENST00000263856 TMEM89A2RUT3 159 aa8.95□□□□□ -0.98
CHMP3-201ENST00000263856 STHQ8IWL8 128 aa8.95□□□□□ -0.98
CHMP3-201ENST00000263856 PEMTQ9UBM1 199 aa8.95□□□□□ -0.98
CHMP3-201ENST00000263856 PIK3CD-AS1Q5SR53 167 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 MTORP42345 2549 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 LST1O00453 97 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 PRB1P04280 392 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
CHMP3-201ENST00000263856 Q6ZTI0 123 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
CHMP3-201ENST00000263856 Q8N2B8 174 aa8.93□□□□□ -0.98
CHMP3-201ENST00000263856 UBE2L6O14933 153 aa8.92□□□□□ -0.98
CHMP3-201ENST00000263856 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
CHMP3-201ENST00000263856 C11orf72Q8NBR9 251 aa8.92□□□□□ -0.98
CHMP3-201ENST00000263856 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
CHMP3-201ENST00000263856 CHCHD5Q9BSY4 110 aa8.92□□□□□ -0.98
CHMP3-201ENST00000263856 C11orf68Q9H3H3 251 aaKnown RBP8.92□□□□□ -0.98
CHMP3-201ENST00000263856 H3BT86 120 aa8.92□□□□□ -0.98
CHMP3-201ENST00000263856 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
CHMP3-201ENST00000263856 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
CHMP3-201ENST00000263856 ACANP16112 2415 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 NDUFA1O15239 70 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 GAGE7O76087 117 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 Q9HAA7 133 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
CHMP3-201ENST00000263856 HERVK_113P63121 156 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 Q6YL49 198 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 AKAP9Q99996 3911 aa8.91□□□□□ -0.98
CHMP3-201ENST00000263856 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
CHMP3-201ENST00000263856 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
CHMP3-201ENST00000263856 RS1O15537 224 aa8.9□□□□□ -0.98
CHMP3-201ENST00000263856 RPL35AP18077 110 aaKnown RBP8.9□□□□□ -0.98
CHMP3-201ENST00000263856 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.98
CHMP3-201ENST00000263856 DEFB114Q30KQ6 69 aa8.89□□□□□ -0.99
CHMP3-201ENST00000263856 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
CHMP3-201ENST00000263856 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 DSCR9P59020 149 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 KRTAP10-9P60411 292 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 M0QXV9 152 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 ODF3L2Q3SX64 289 aa8.88□□□□□ -0.99
CHMP3-201ENST00000263856 K7EQD1 137 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 DAZ2Q13117 558 aaKnown RBP8.87□□□□□ -0.99
CHMP3-201ENST00000263856 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
CHMP3-201ENST00000263856 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
CHMP3-201ENST00000263856 IGHV4-31P0DP07 118 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 TIRAPP58753 221 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 C1orf158Q8N1D5 194 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 FAM236AA0A1B0GUQ0 79 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 FAM236BA0A1B0GV22 79 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 BAALC-AS2P0C853 105 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 PFN2P35080 140 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 LINC00158P58513 81 aa8.87□□□□□ -0.99
CHMP3-201ENST00000263856 COX7A2LO14548 114 aa8.86□□□□□ -0.99
CHMP3-201ENST00000263856 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
CHMP3-201ENST00000263856 ZNF469Q96JG9 3925 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-201ENST00000263856 J3QLI3 93 aa8.85□□□□□ -0.99
CHMP3-201ENST00000263856 SMIM20Q8N5G0 67 aa8.85□□□□□ -0.99
CHMP3-201ENST00000263856 EDA2RQ9HAV5 297 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms