RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
ZNF541-201ENST00000263351 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
ZNF541-201ENST00000263351 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
ZNF541-201ENST00000263351 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
ZNF541-201ENST00000263351 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
ZNF541-201ENST00000263351 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
ZNF541-201ENST00000263351 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
ZNF541-201ENST00000263351 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
ZNF541-201ENST00000263351 GCN1Q92616 2671 aaKnown RBP11.91□□□□□ -0.5
ZNF541-201ENST00000263351 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
ZNF541-201ENST00000263351 MIAQ16674 131 aa11.91□□□□□ -0.5
ZNF541-201ENST00000263351 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
ZNF541-201ENST00000263351 PLA2G2AP14555 144 aa11.9□□□□□ -0.5
ZNF541-201ENST00000263351 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
ZNF541-201ENST00000263351 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.5
ZNF541-201ENST00000263351 NHLRC4P0CG21 123 aaPredicted RBP11.9□□□□□ -0.5
ZNF541-201ENST00000263351 Q8N2B8 174 aa11.89□□□□□ -0.51
ZNF541-201ENST00000263351 CITED1Q99966 193 aa11.89□□□□□ -0.51
ZNF541-201ENST00000263351 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
ZNF541-201ENST00000263351 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
ZNF541-201ENST00000263351 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
ZNF541-201ENST00000263351 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
ZNF541-201ENST00000263351 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
ZNF541-201ENST00000263351 Q9H8V8 135 aa11.88□□□□□ -0.51
ZNF541-201ENST00000263351 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
ZNF541-201ENST00000263351 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
ZNF541-201ENST00000263351 Q6YL49 198 aa11.88□□□□□ -0.51
ZNF541-201ENST00000263351 TRGV1A0A0A0MS02 117 aa11.87□□□□□ -0.51
ZNF541-201ENST00000263351 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
ZNF541-201ENST00000263351 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
ZNF541-201ENST00000263351 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
ZNF541-201ENST00000263351 WFDC10AQ9H1F0 79 aa11.87□□□□□ -0.51
ZNF541-201ENST00000263351 DGAT2L7PQ6IED9 249 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 Q6ZTI0 123 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 SVIPQ8NHG7 77 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 DYNLRB2Q8TF09 96 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 SPANXCQ9NY87 97 aa11.86□□□□□ -0.51
ZNF541-201ENST00000263351 UBR5O95071 2799 aaPredicted RBP11.86□□□□□ -0.51
ZNF541-201ENST00000263351 LINC00242Q5T6M2 205 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 C15orf53Q8NAA6 179 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 IGHV4-31P0DP07 118 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
ZNF541-201ENST00000263351 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
ZNF541-201ENST00000263351 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
ZNF541-201ENST00000263351 B5MCH6 92 aa11.84□□□□□ -0.51
ZNF541-201ENST00000263351 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
ZNF541-201ENST00000263351 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
ZNF541-201ENST00000263351 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 SNCGO76070 127 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 GAGE4Q13068 117 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 GAGE5Q13069 117 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 DEFB114Q30KQ6 69 aa11.83□□□□□ -0.52
ZNF541-201ENST00000263351 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
ZNF541-201ENST00000263351 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
ZNF541-201ENST00000263351 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
ZNF541-201ENST00000263351 Q96MF0 132 aa11.82□□□□□ -0.52
ZNF541-201ENST00000263351 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
ZNF541-201ENST00000263351 C3orf56Q8N813 242 aa11.81□□□□□ -0.52
ZNF541-201ENST00000263351 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
ZNF541-201ENST00000263351 EDA2RQ9HAV5 297 aa11.81□□□□□ -0.52
ZNF541-201ENST00000263351 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
ZNF541-201ENST00000263351 LST1O00453 97 aa11.81□□□□□ -0.52
ZNF541-201ENST00000263351 INSP01308 110 aa11.8□□□□□ -0.52
ZNF541-201ENST00000263351 VWFP04275 2813 aa11.8□□□□□ -0.52
ZNF541-201ENST00000263351 A8MTW9 85 aa11.8□□□□□ -0.52
ZNF541-201ENST00000263351 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
ZNF541-201ENST00000263351 RS1O15537 224 aa11.8□□□□□ -0.52
ZNF541-201ENST00000263351 NDUFA1O15239 70 aa11.79□□□□□ -0.52
ZNF541-201ENST00000263351 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
ZNF541-201ENST00000263351 FSHBP01225 129 aa11.79□□□□□ -0.52
ZNF541-201ENST00000263351 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
ZNF541-201ENST00000263351 BEAN1Q3B7T3 259 aa11.78□□□□□ -0.52
ZNF541-201ENST00000263351 MEIG1Q5JSS6 88 aa11.78□□□□□ -0.52
ZNF541-201ENST00000263351 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
ZNF541-201ENST00000263351 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.52
ZNF541-201ENST00000263351 ITPR2Q14571 2701 aa11.77□□□□□ -0.52
ZNF541-201ENST00000263351 COX6CP09669 75 aa11.77□□□□□ -0.53
ZNF541-201ENST00000263351 BBC3Q96PG8 261 aaPredicted RBP11.76□□□□□ -0.53
ZNF541-201ENST00000263351 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
ZNF541-201ENST00000263351 STHQ8IWL8 128 aa11.76□□□□□ -0.53
ZNF541-201ENST00000263351 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
ZNF541-201ENST00000263351 M0QXV9 152 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 Q9HAA7 133 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 PEMTQ9UBM1 199 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
ZNF541-201ENST00000263351 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
ZNF541-201ENST00000263351 RPL35AP18077 110 aaKnown RBP11.74□□□□□ -0.53
ZNF541-201ENST00000263351 TIRAPP58753 221 aa11.74□□□□□ -0.53
ZNF541-201ENST00000263351 DSCR9P59020 149 aa11.74□□□□□ -0.53
ZNF541-201ENST00000263351 F5H768 121 aa11.74□□□□□ -0.53
ZNF541-201ENST00000263351 J3QLI3 93 aa11.74□□□□□ -0.53
ZNF541-201ENST00000263351 GAGE7O76087 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms