RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 TIRAPP58753 221 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 EBI3Q14213 229 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 A0A0J9YXV3 536 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 G3V318 75 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 CXCL5P42830 114 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 C1orf229Q6ZS94 237 aaPredicted RBP6.33□□□□□ -1.4
LDB3-201ENST00000263066 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 LST1O00453 97 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 HAMPP81172 84 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
LDB3-201ENST00000263066 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
LDB3-201ENST00000263066 MOB4Q9Y3A3 225 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 PSMB8P28062 276 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 DAD1P61803 113 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 IGHV3OR16-12A0A075B7B8 117 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 VCYO14598 125 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 PF4P02776 101 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 DEFB112Q30KQ8 113 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 LINC01561Q8N1V8 128 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 LEPROTO15243 131 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 TSPEAR-AS2P59090 65 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
LDB3-201ENST00000263066 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
LDB3-201ENST00000263066 CLEC19AQ6UXS0 136 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 PRIMA1Q86XR5 153 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 RITA1Q96K30 269 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 IGHV1-3A0A0C4DH29 117 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 RNASE4P34096 147 aaKnown RBP6.31□□□□□ -1.4
LDB3-201ENST00000263066 BLCAPP62952 87 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 FBXL19-AS1Q494R0 122 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 TMEM190Q8WZ59 177 aa6.31□□□□□ -1.4
LDB3-201ENST00000263066 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
LDB3-201ENST00000263066 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
LDB3-201ENST00000263066 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 CRYGDP07320 174 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 PAX8Q06710 450 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 PDE6HQ13956 83 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 SS18Q15532 418 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 Q5XG85 94 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 DYNLRB2Q8TF09 96 aa6.3□□□□□ -1.4
LDB3-201ENST00000263066 C17orf58Q2M2W7 97 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 UBL5Q9BZL1 73 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 H3BRN7 92 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 NBR2O15453 112 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 CRPP02741 224 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 FAM110DQ8TAY7 271 aaPredicted RBP6.29□□□□□ -1.4
LDB3-201ENST00000263066 DEFB136Q30KP8 78 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 ZNF876PQ49A33 203 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
LDB3-201ENST00000263066 ZNF491Q8N8L2 437 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 NRACQ8N912 160 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 IGHV1-69DA0A0B4J2H0 117 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 F8WEM9 126 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 IGHV1-69P01742 117 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 DSCR9P59020 149 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 FHL2Q14192 279 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
LDB3-201ENST00000263066 IGHV1OR15-1A0A075B7D0 117 aa6.27□□□□□ -1.4
LDB3-201ENST00000263066 OXTP01178 125 aa6.27□□□□□ -1.4
LDB3-201ENST00000263066 XCL1P47992 114 aa6.27□□□□□ -1.4
LDB3-201ENST00000263066 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.4
LDB3-201ENST00000263066 XCL2Q9UBD3 114 aa6.27□□□□□ -1.4
LDB3-201ENST00000263066 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
LDB3-201ENST00000263066 IGHV3-30-3P0DP02 117 aa6.27□□□□□ -1.41
LDB3-201ENST00000263066 HILS1P60008 231 aa6.27□□□□□ -1.41
LDB3-201ENST00000263066 LMO4P61968 165 aa6.27□□□□□ -1.41
LDB3-201ENST00000263066 C9orf139Q6ZV77 190 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 COX7A2LO14548 114 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 AVPP01185 164 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 IGKV3OR2-268A0A0C4DH90 116 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
LDB3-201ENST00000263066 A8MZ25 164 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 BUB3O43684 328 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 ATP6V0E1O15342 81 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 LHBP01229 141 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 IGHV3-73A0A0B4J1V6 119 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 C15orf32Q32M92 178 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 DEFB121Q5J5C9 76 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 UPK3BQ9BT76 320 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 ZNF580Q9UK33 172 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 IGLV2-18A0A075B6J9 118 aa6.25□□□□□ -1.41
LDB3-201ENST00000263066 TMEM89A2RUT3 159 aa6.24□□□□□ -1.41
LDB3-201ENST00000263066 NCR3O14931 201 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms