RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 A0A0U1RRA0 63 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 COX6A2Q02221 97 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 DGAT2L7PQ6IED9 249 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 DYNLRB2Q8TF09 96 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 ZNF625Q96I27 306 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-201ENST00000261693 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 TMEM101Q96IK0 257 aa13.97□□□□□ -0.17
SCARB1-201ENST00000261693 RPL13AP40429 203 aaKnown RBP13.96□□□□□ -0.17
SCARB1-201ENST00000261693 JMJD1CQ15652 2540 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 TRAV4A0A0B4J268 109 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 COX6CP09669 75 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 UBE2WQ96B02 151 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 CITED1Q99966 193 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 ANAPC13Q9BS18 74 aa13.96□□□□□ -0.17
SCARB1-201ENST00000261693 ZNF462Q96JM2 2506 aa13.96□□□□□ -0.18
SCARB1-201ENST00000261693 NDUFA7O95182 113 aa13.95□□□□□ -0.18
SCARB1-201ENST00000261693 CR1P17927 2039 aa13.95□□□□□ -0.18
SCARB1-201ENST00000261693 PEMTQ9UBM1 199 aa13.95□□□□□ -0.18
SCARB1-201ENST00000261693 TRAV8-4A0A0B4J246 113 aa13.94□□□□□ -0.18
SCARB1-201ENST00000261693 SNCGO76070 127 aa13.94□□□□□ -0.18
SCARB1-201ENST00000261693 INSP01308 110 aa13.94□□□□□ -0.18
SCARB1-201ENST00000261693 PIK3CD-AS1Q5SR53 167 aa13.94□□□□□ -0.18
SCARB1-201ENST00000261693 YAE1D1Q9NRH1 226 aa13.94□□□□□ -0.18
SCARB1-201ENST00000261693 LINC00694P0DN24 101 aa13.93□□□□□ -0.18
SCARB1-201ENST00000261693 DNAJC30Q96LL9 226 aa13.93□□□□□ -0.18
SCARB1-201ENST00000261693 RS1O15537 224 aa13.93□□□□□ -0.18
SCARB1-201ENST00000261693 IGHV4-31P0DP07 118 aa13.93□□□□□ -0.18
SCARB1-201ENST00000261693 BEAN1Q3B7T3 259 aa13.93□□□□□ -0.18
SCARB1-201ENST00000261693 FSHBP01225 129 aa13.92□□□□□ -0.18
SCARB1-201ENST00000261693 DEFB114Q30KQ6 69 aa13.92□□□□□ -0.18
SCARB1-201ENST00000261693 Q9H8V8 135 aa13.92□□□□□ -0.18
SCARB1-201ENST00000261693 NDUFA1O15239 70 aa13.92□□□□□ -0.18
SCARB1-201ENST00000261693 TRGV1A0A0A0MS02 117 aa13.91□□□□□ -0.18
SCARB1-201ENST00000261693 GAGE2BQ13066 116 aa13.91□□□□□ -0.18
SCARB1-201ENST00000261693 GAGE2EQ4V326 116 aa13.91□□□□□ -0.18
SCARB1-201ENST00000261693 GAGE2DQ9UEU5 116 aa13.91□□□□□ -0.18
SCARB1-201ENST00000261693 TRAV13-1A0A0B4J241 112 aa13.9□□□□□ -0.18
SCARB1-201ENST00000261693 LST1O00453 97 aa13.9□□□□□ -0.18
SCARB1-201ENST00000261693 TIRAPP58753 221 aa13.9□□□□□ -0.18
SCARB1-201ENST00000261693 LINC00242Q5T6M2 205 aa13.9□□□□□ -0.18
SCARB1-201ENST00000261693 CITED2Q99967 270 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-201ENST00000261693 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
SCARB1-201ENST00000261693 IGLV5-45A0A087WSX0 123 aa13.89□□□□□ -0.19
SCARB1-201ENST00000261693 TIMM17BO60830 172 aa13.89□□□□□ -0.19
SCARB1-201ENST00000261693 LINC01600Q96MT4 127 aa13.89□□□□□ -0.19
SCARB1-201ENST00000261693 IFITM1P13164 125 aa13.89□□□□□ -0.19
SCARB1-201ENST00000261693 CIRBPQ14011 172 aaKnown RBP13.89□□□□□ -0.19
SCARB1-201ENST00000261693 C11orf44Q8N8P7 122 aa13.89□□□□□ -0.19
SCARB1-201ENST00000261693 C15orf53Q8NAA6 179 aa13.88□□□□□ -0.19
SCARB1-201ENST00000261693 LINC00308Q8TCZ7 52 aa13.88□□□□□ -0.19
SCARB1-201ENST00000261693 SETXQ7Z333 2677 aaKnown RBP13.88□□□□□ -0.19
SCARB1-201ENST00000261693 ODF3L2Q3SX64 289 aa13.87□□□□□ -0.19
SCARB1-201ENST00000261693 H3BT86 120 aa13.87□□□□□ -0.19
SCARB1-201ENST00000261693 NBPF19A0A087WUL8 3843 aa13.87□□□□□ -0.19
SCARB1-201ENST00000261693 NHLRC4P0CG21 123 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-201ENST00000261693 KRTAP10-9P60411 292 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 HERVK_113P63121 156 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 C1orf158Q8N1D5 194 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 A0A1W2PRX2 142 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 TTC32Q5I0X7 151 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 STHQ8IWL8 128 aa13.86□□□□□ -0.19
SCARB1-201ENST00000261693 CCDC168Q8NDH2 2452 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 Q6ZTI0 123 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 PRB1P04280 392 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 NTM-AS1Q6ZSK4 140 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 Q8N2B8 174 aa13.85□□□□□ -0.19
SCARB1-201ENST00000261693 SMIM1B2RUZ4 78 aa13.84□□□□□ -0.19
SCARB1-201ENST00000261693 NDUFV3P56181 108 aaKnown RBP13.84□□□□□ -0.19
SCARB1-201ENST00000261693 SOSTDC1Q6X4U4 206 aa13.84□□□□□ -0.19
SCARB1-201ENST00000261693 GAGE12JA6NER3 117 aa13.83□□□□□ -0.2
SCARB1-201ENST00000261693 GAGE4Q13068 117 aa13.83□□□□□ -0.2
SCARB1-201ENST00000261693 GAGE5Q13069 117 aa13.83□□□□□ -0.2
SCARB1-201ENST00000261693 MEIG1Q5JSS6 88 aa13.83□□□□□ -0.2
SCARB1-201ENST00000261693 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
SCARB1-201ENST00000261693 RPL36AP83881 106 aaKnown RBP13.82□□□□□ -0.2
SCARB1-201ENST00000261693 RPL36ALQ969Q0 106 aaKnown RBP13.82□□□□□ -0.2
SCARB1-201ENST00000261693 K7EQD1 137 aa13.81□□□□□ -0.2
SCARB1-201ENST00000261693 ITPR3Q14573 2671 aa13.81□□□□□ -0.2
SCARB1-201ENST00000261693 B5MCH6 92 aa13.79□□□□□ -0.2
SCARB1-201ENST00000261693 IL17DQ8TAD2 202 aa13.79□□□□□ -0.2
SCARB1-201ENST00000261693 NOP10Q9NPE3 64 aaKnown RBP13.79□□□□□ -0.2
SCARB1-201ENST00000261693 SS18L2Q9UHA2 77 aa13.79□□□□□ -0.2
SCARB1-201ENST00000261693 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
SCARB1-201ENST00000261693 APCP25054 2843 aa13.78□□□□□ -0.2
SCARB1-201ENST00000261693 GAGE6Q13070 117 aa13.77□□□□□ -0.2
SCARB1-201ENST00000261693 Q96MF0 132 aa13.77□□□□□ -0.2
SCARB1-201ENST00000261693 USP24Q9UPU5 2620 aa13.77□□□□□ -0.2
SCARB1-201ENST00000261693 F5H768 121 aa13.77□□□□□ -0.21
SCARB1-201ENST00000261693 COX7A2LO14548 114 aa13.77□□□□□ -0.21
SCARB1-201ENST00000261693 DAZ2Q13117 558 aaKnown RBP13.77□□□□□ -0.21
SCARB1-201ENST00000261693 DAZ4Q86SG3 579 aaKnown RBP13.77□□□□□ -0.21
SCARB1-201ENST00000261693 DAZ3Q9NR90 486 aaKnown RBP13.77□□□□□ -0.21
SCARB1-201ENST00000261693 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
SCARB1-201ENST00000261693 CCDC179H3BU77 68 aa13.76□□□□□ -0.21
SCARB1-201ENST00000261693 CSDC2Q9Y534 153 aaKnown RBP13.76□□□□□ -0.21
SCARB1-201ENST00000261693 IGKV3OR2-268A0A0C4DH90 116 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 LOC100131303A0A0U1RQF7 123 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 DEFB121Q5J5C9 76 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms