RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 LST1O00453 97 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 H0Y9J4 135 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
HERC2-201ENST00000261609 DKK4Q9UBT3 224 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 PTPRSQ13332 1948 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 TRBV10-1A0A0K0K1A3 114 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 UBE2AP49459 152 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 Q96MF0 132 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 ODF3Q96PU9 254 aa5.42□□□□□ -1.54
HERC2-201ENST00000261609 BRWD1-AS2P59051 145 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 Q6JHZ5 121 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 LINC00574Q9H8X3 128 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 Q6ZS46 218 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 IGLV2-11P01706 119 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 DEFB136Q30KP8 78 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 Q8N9W7 124 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 PRR4Q16378 134 aa5.41□□□□□ -1.54
HERC2-201ENST00000261609 NRACQ8N912 160 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 IGHV4-59P01825 116 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 LINC00467Q9BRT7 94 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 USP24Q9UPU5 2620 aa5.4□□□□□ -1.54
HERC2-201ENST00000261609 LRP4O75096 1905 aa5.4□□□□□ -1.55
HERC2-201ENST00000261609 WT1P19544 449 aaPredicted RBP5.4□□□□□ -1.55
HERC2-201ENST00000261609 CRIP2P52943 208 aaPredicted RBP5.4□□□□□ -1.55
HERC2-201ENST00000261609 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.55
HERC2-201ENST00000261609 PSPHP1O15172 72 aa5.4□□□□□ -1.55
HERC2-201ENST00000261609 SPAG11BQ08648 103 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 CCKP06307 115 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 CPAMD8Q8IZJ3 1885 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 M0QY20 66 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 DEFB112Q30KQ8 113 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 TRBV27A0A0K0K1C4 114 aa5.39□□□□□ -1.55
HERC2-201ENST00000261609 C4orf3Q8WVX3 66 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 CEP295Q9C0D2 2601 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 A0A0J9YX75 114 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 IGHV4-38-2P0DP08 117 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 EIF4EBP1Q13541 118 aaPredicted RBP5.38□□□□□ -1.55
HERC2-201ENST00000261609 SP5Q6BEB4 398 aaPredicted RBP5.38□□□□□ -1.55
HERC2-201ENST00000261609 IBA57-AS1B1ANH7 110 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 POM121L12Q8N7R1 296 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 COL4A3Q01955 1670 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 ZFAND2AQ8N6M9 145 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 IGF1P05019 195 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 WFDC10BQ8IUB3 73 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 Q6ZPA2 131 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
HERC2-201ENST00000261609 IGLV1-47P01700 117 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 VPREB1P12018 145 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 CCDC140Q96MF4 163 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 MYCNOSP40205 109 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 SMIM11BQ8TCY0 68 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 PRORYQ9H606 182 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 UBE2D3P61077 147 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 UBE2D2P62837 147 aa5.37□□□□□ -1.55
HERC2-201ENST00000261609 K7ERS5 55 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 C9orf66Q5T8R8 295 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 UNQ9165/PRO28630Q6UXU0 137 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 GAS8-AS1O95177 125 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 SIRPDQ9H106 197 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 A8MZ25 164 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 Q8N7P7 452 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 TMEM89A2RUT3 159 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 CCL18P55774 89 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 C22orf34Q6ZV56 151 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 UBE2D1P51668 147 aa5.36□□□□□ -1.55
HERC2-201ENST00000261609 A0A0J9YWU9 116 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 FAM222AQ5U5X8 452 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 CRIP3Q6Q6R5 217 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 EBI3Q14213 229 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 IGHV4-30-2A0A087WSY4 118 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 C1orf158Q8N1D5 194 aa5.35□□□□□ -1.55
HERC2-201ENST00000261609 COL5A1P20908 1838 aaPredicted RBP5.35□□□□□ -1.55
HERC2-201ENST00000261609 ZFP36P26651 326 aaKnown RBP5.35□□□□□ -1.55
HERC2-201ENST00000261609 PYGO1Q9Y3Y4 419 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 TRBV7-6A0A0J9YX20 115 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 IGFL2Q6UWQ7 119 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 URB1-AS1Q96HZ7 61 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 B9D2Q9BPU9 175 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 KLK12Q9UKR0 248 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 LINC00269Q8N2A0 174 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 SMAD5-AS1Q9Y6J3 95 aa5.34□□□□□ -1.55
HERC2-201ENST00000261609 RAI1Q7Z5J4 1906 aaPredicted RBP5.34□□□□□ -1.55
HERC2-201ENST00000261609 IGIPA6NJ69 53 aa5.34□□□□□ -1.56
HERC2-201ENST00000261609 GRNP28799 593 aaKnown RBP5.34□□□□□ -1.56
HERC2-201ENST00000261609 ESM1Q9NQ30 184 aa5.34□□□□□ -1.56
HERC2-201ENST00000261609 PLA2G2CQ5R387 149 aa5.33□□□□□ -1.56
HERC2-201ENST00000261609 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
HERC2-201ENST00000261609 C1orf229Q6ZS94 237 aaPredicted RBP5.33□□□□□ -1.56
HERC2-201ENST00000261609 NANOS2P60321 138 aaKnown RBP5.33□□□□□ -1.56
HERC2-201ENST00000261609 PROK1P58294 105 aa5.33□□□□□ -1.56
HERC2-201ENST00000261609 TRBV7-7A0A0K0K1E9 115 aa5.33□□□□□ -1.56
HERC2-201ENST00000261609 ANKRD17O75179 2603 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms