RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TIMM21Q9BVV7 248 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 RYR2Q92736 4967 aa14.09□□□□□ -0.15
RTCA-201ENST00000260563 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
RTCA-201ENST00000260563 AMMECR1LQ6DCA0 310 aa14.09□□□□□ -0.15
RTCA-201ENST00000260563 DNAH10OSP0CZ25 163 aa14.08□□□□□ -0.16
RTCA-201ENST00000260563 CSDC2Q9Y534 153 aaKnown RBP14.08□□□□□ -0.16
RTCA-201ENST00000260563 ZNF25P17030 456 aaPredicted RBP14.07□□□□□ -0.16
RTCA-201ENST00000260563 DGAT2L7PQ6IED9 249 aa14.07□□□□□ -0.16
RTCA-201ENST00000260563 OR10D4PQ8NGN7 298 aa14.07□□□□□ -0.16
RTCA-201ENST00000260563 MAP1LC3CQ9BXW4 147 aa14.07□□□□□ -0.16
RTCA-201ENST00000260563 NBDYA0A0U1RRE5 68 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 NPSP0C0P6 89 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 PKIAP61925 76 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 LINC01556Q5JQF7 62 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 Q6ZN92 141 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 TMEM101Q96IK0 257 aa14.06□□□□□ -0.16
RTCA-201ENST00000260563 OPRPNQ99935 248 aaPredicted RBP14.06□□□□□ -0.16
RTCA-201ENST00000260563 IGLV4-3A0A075B6K6 122 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 LOC105371267A0A1B0GV96 52 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 M0R2N4 97 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 OR5A1Q8NGJ0 315 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 C3orf79P0CE67 100 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 KRTDAPP60985 99 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 MPV17L2Q567V2 206 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 BAALCQ8WXS3 180 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 FAM104AQ969W3 186 aa14.05□□□□□ -0.16
RTCA-201ENST00000260563 A0A1B0GUV1 79 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 IGHV3-30P01768 117 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 IGHV3-33P01772 117 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 PRSS1P07477 247 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 IGHV3-30-3P0DP02 117 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 IGHV3-30-5P0DP03 117 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 RBX1P62877 108 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 MRPS36P82909 103 aaKnown RBP14.04□□□□□ -0.16
RTCA-201ENST00000260563 Q6ZUT4 128 aa14.04□□□□□ -0.16
RTCA-201ENST00000260563 TRAV9-2A0A087WT02 112 aa14.03□□□□□ -0.16
RTCA-201ENST00000260563 A0A087WX48 190 aa14.03□□□□□ -0.16
RTCA-201ENST00000260563 SYS1-DBNDD2H3BUS1 97 aa14.03□□□□□ -0.16
RTCA-201ENST00000260563 PAPPA-AS1Q5QFB9 102 aa14.03□□□□□ -0.16
RTCA-201ENST00000260563 Q8N976 141 aa14.03□□□□□ -0.16
RTCA-201ENST00000260563 IGLV4-60A0A075B6I1 120 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 H0Y8G0 127 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 K7EP13 123 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 ZNF664Q8N3J9 261 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 Q8N3U1 123 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 C10orf126Q8N4M7 172 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 CDC42SE2Q9NRR3 84 aa14.02□□□□□ -0.16
RTCA-201ENST00000260563 RYR3Q15413 4870 aa14.01□□□□□ -0.17
RTCA-201ENST00000260563 RNASE13Q5GAN3 156 aaKnown RBP14.01□□□□□ -0.17
RTCA-201ENST00000260563 Q6ZR54 194 aa14.01□□□□□ -0.17
RTCA-201ENST00000260563 KRTAP1-5Q9BYS1 174 aa14.01□□□□□ -0.17
RTCA-201ENST00000260563 VCX2Q9H322 139 aa14.01□□□□□ -0.17
RTCA-201ENST00000260563 AKR1D1P51857 326 aa14□□□□□ -0.17
RTCA-201ENST00000260563 PMVKQ15126 192 aa14□□□□□ -0.17
RTCA-201ENST00000260563 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
RTCA-201ENST00000260563 AMELXQ99217 191 aa14□□□□□ -0.17
RTCA-201ENST00000260563 ZC2HC1BQ5TFG8 222 aa14□□□□□ -0.17
RTCA-201ENST00000260563 PET117Q6UWS5 81 aa14□□□□□ -0.17
RTCA-201ENST00000260563 SPATA12Q7Z6I5 190 aa14□□□□□ -0.17
RTCA-201ENST00000260563 TRAV12-1A0A0B4J245 112 aa13.99□□□□□ -0.17
RTCA-201ENST00000260563 CST9LQ9H4G1 147 aa13.99□□□□□ -0.17
RTCA-201ENST00000260563 PRSS29PA6NIE9 313 aa13.97□□□□□ -0.17
RTCA-201ENST00000260563 C2orf88Q9BSF0 95 aa13.97□□□□□ -0.17
RTCA-201ENST00000260563 DNAH2Q9P225 4427 aa13.97□□□□□ -0.17
RTCA-201ENST00000260563 ANGP03950 147 aaKnown RBP13.96□□□□□ -0.17
RTCA-201ENST00000260563 ODF1Q14990 250 aa13.95□□□□□ -0.18
RTCA-201ENST00000260563 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
RTCA-201ENST00000260563 KLK12Q9UKR0 248 aa13.95□□□□□ -0.18
RTCA-201ENST00000260563 C20orf202A1L168 122 aa13.94□□□□□ -0.18
RTCA-201ENST00000260563 IBA57-AS1B1ANH7 110 aa13.94□□□□□ -0.18
RTCA-201ENST00000260563 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
RTCA-201ENST00000260563 CHTOPQ9Y3Y2 248 aaKnown RBP13.94□□□□□ -0.18
RTCA-201ENST00000260563 FRAS1Q86XX4 4008 aa13.93□□□□□ -0.18
RTCA-201ENST00000260563 SCGB1D1O95968 90 aa13.93□□□□□ -0.18
RTCA-201ENST00000260563 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
RTCA-201ENST00000260563 C1orf134Q5TEV5 83 aa13.93□□□□□ -0.18
RTCA-201ENST00000260563 C6orf223Q8N319 242 aa13.93□□□□□ -0.18
RTCA-201ENST00000260563 PMCHL2Q9BQD1 86 aa13.93□□□□□ -0.18
RTCA-201ENST00000260563 IGKV3OR2-268A0A0C4DH90 116 aa13.92□□□□□ -0.18
RTCA-201ENST00000260563 F8VRH5 84 aa13.92□□□□□ -0.18
RTCA-201ENST00000260563 CRPP02741 224 aa13.92□□□□□ -0.18
RTCA-201ENST00000260563 CLPSL2Q6UWE3 100 aa13.92□□□□□ -0.18
RTCA-201ENST00000260563 MRPL35Q9NZE8 188 aaKnown RBP13.92□□□□□ -0.18
RTCA-201ENST00000260563 TRAV13-1A0A0B4J241 112 aa13.91□□□□□ -0.18
RTCA-201ENST00000260563 UBE2D1P51668 147 aa13.91□□□□□ -0.18
RTCA-201ENST00000260563 REG3AQ06141 175 aa13.91□□□□□ -0.18
RTCA-201ENST00000260563 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
RTCA-201ENST00000260563 Q9HAA7 133 aa13.9□□□□□ -0.18
RTCA-201ENST00000260563 DNAH10Q8IVF4 4471 aa13.9□□□□□ -0.18
RTCA-201ENST00000260563 IGLV4-69A0A075B6H9 119 aa13.9□□□□□ -0.19
RTCA-201ENST00000260563 PYY3Q5JQD4 70 aa13.9□□□□□ -0.19
RTCA-201ENST00000260563 PRR34Q9NV39 138 aa13.9□□□□□ -0.19
RTCA-201ENST00000260563 TRAV8-3A0A0A6YYJ7 113 aa13.89□□□□□ -0.19
RTCA-201ENST00000260563 NFE4Q86UQ8 179 aa13.89□□□□□ -0.19
RTCA-201ENST00000260563 A0A0J9YXV3 536 aa13.88□□□□□ -0.19
RTCA-201ENST00000260563 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
RTCA-201ENST00000260563 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
RTCA-201ENST00000260563 FAM19A3Q7Z5A8 133 aa13.88□□□□□ -0.19
RTCA-201ENST00000260563 DPM2O94777 84 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms