RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
ZSWIM3-201ENST00000255152 RS1O15537 224 aa9.57□□□□□ -0.88
ZSWIM3-201ENST00000255152 C9orf139Q6ZV77 190 aa9.57□□□□□ -0.88
ZSWIM3-201ENST00000255152 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
ZSWIM3-201ENST00000255152 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
ZSWIM3-201ENST00000255152 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
ZSWIM3-201ENST00000255152 C15orf32Q32M92 178 aa9.56□□□□□ -0.88
ZSWIM3-201ENST00000255152 LINC00336Q6ZUF6 198 aa9.56□□□□□ -0.88
ZSWIM3-201ENST00000255152 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
ZSWIM3-201ENST00000255152 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
ZSWIM3-201ENST00000255152 NOTCH2Q04721 2471 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 NDUFC2O95298 119 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 MAPK1IP1LQ8NDC0 245 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 ITPR2Q14571 2701 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 DNAL4O96015 105 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 ZFP36P26651 326 aaKnown RBP9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 FHL2Q14192 279 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
ZSWIM3-201ENST00000255152 A0A087WVE0 104 aa9.54□□□□□ -0.88
ZSWIM3-201ENST00000255152 A8MZ25 164 aa9.54□□□□□ -0.88
ZSWIM3-201ENST00000255152 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
ZSWIM3-201ENST00000255152 U3KQE9 123 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 IGHV4-61A0A0C4DH41 118 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 M0QY20 66 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 CD28P10747 220 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 CLEC19AQ6UXS0 136 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 APRG1Q8IVJ8 170 aa9.53□□□□□ -0.88
ZSWIM3-201ENST00000255152 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.88
ZSWIM3-201ENST00000255152 PRIMA1Q86XR5 153 aa9.52□□□□□ -0.88
ZSWIM3-201ENST00000255152 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.89
ZSWIM3-201ENST00000255152 ZFHX3Q15911 3703 aa9.52□□□□□ -0.89
ZSWIM3-201ENST00000255152 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
ZSWIM3-201ENST00000255152 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
ZSWIM3-201ENST00000255152 Q8N2B8 174 aa9.52□□□□□ -0.89
ZSWIM3-201ENST00000255152 ZANQ9Y493 2812 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 PSMB8P28062 276 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 LMO4P61968 165 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 ZNF415Q09FC8 603 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 CCDC140Q96MF4 163 aa9.51□□□□□ -0.89
ZSWIM3-201ENST00000255152 ABCA2Q9BZC7 2435 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM223BA6NKX1 122 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 EPM2AB3EWF7 344 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 DEFB1P60022 68 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM110DQ8TAY7 271 aaPredicted RBP9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM218AQ96MZ4 157 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 CSPG4Q6UVK1 2322 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 EDN2P20800 178 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 ZNF469Q96JG9 3925 aaPredicted RBP9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 NDUFA1O15239 70 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
ZSWIM3-201ENST00000255152 DEFB113Q30KQ7 82 aa9.48□□□□□ -0.89
ZSWIM3-201ENST00000255152 FAM223AQ8IWN6 122 aa9.48□□□□□ -0.89
ZSWIM3-201ENST00000255152 Q9HAA7 133 aa9.48□□□□□ -0.89
ZSWIM3-201ENST00000255152 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.48□□□□□ -0.89
ZSWIM3-201ENST00000255152 TMEM86BQ8N661 226 aa9.48□□□□□ -0.89
ZSWIM3-201ENST00000255152 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
ZSWIM3-201ENST00000255152 TLN2Q9Y4G6 2542 aa9.47□□□□□ -0.89
ZSWIM3-201ENST00000255152 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
ZSWIM3-201ENST00000255152 Q8N6K4 173 aa9.47□□□□□ -0.89
ZSWIM3-201ENST00000255152 F6UB75 175 aa9.46□□□□□ -0.89
ZSWIM3-201ENST00000255152 KLK9Q2XQG4 91 aa9.46□□□□□ -0.89
ZSWIM3-201ENST00000255152 KLK9Q9UKQ9 250 aa9.46□□□□□ -0.89
ZSWIM3-201ENST00000255152 SOCS3O14543 225 aa9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 GHRHP01286 108 aa9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 IGHG2P01859 326 aa9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 FLNBO75369 2602 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
ZSWIM3-201ENST00000255152 CREBBPQ92793 2442 aa9.45□□□□□ -0.9
ZSWIM3-201ENST00000255152 SEC61GP60059 68 aa9.45□□□□□ -0.9
ZSWIM3-201ENST00000255152 Q96MF0 132 aa9.45□□□□□ -0.9
ZSWIM3-201ENST00000255152 KLLNB2CW77 178 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 PDZD2O15018 2839 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 ACANP16112 2415 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 HIST2H2BDQ6DRA6 164 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 SOSTDC1Q6X4U4 206 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
ZSWIM3-201ENST00000255152 A0A0U1RRA0 63 aa9.43□□□□□ -0.9
ZSWIM3-201ENST00000255152 TRBV12-3P01733 135 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms