RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TSHBP01222 138 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
UBE4B-201ENST00000253251 CENPFP49454 3210 aa10.99□□□□□ -0.65
UBE4B-201ENST00000253251 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-201ENST00000253251 ACYP1P07311 99 aa10.99□□□□□ -0.65
UBE4B-201ENST00000253251 PCSK5Q92824 1860 aa10.98□□□□□ -0.65
UBE4B-201ENST00000253251 PTH2Q96A98 100 aa10.98□□□□□ -0.65
UBE4B-201ENST00000253251 ABCA2Q9BZC7 2435 aa10.98□□□□□ -0.65
UBE4B-201ENST00000253251 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
UBE4B-201ENST00000253251 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-201ENST00000253251 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
UBE4B-201ENST00000253251 A0A0B4J2C4 111 aa10.97□□□□□ -0.65
UBE4B-201ENST00000253251 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
UBE4B-201ENST00000253251 LELP1Q5T871 98 aa10.97□□□□□ -0.65
UBE4B-201ENST00000253251 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
UBE4B-201ENST00000253251 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
UBE4B-201ENST00000253251 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-201ENST00000253251 NTN5Q8WTR8 489 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-201ENST00000253251 WFDC10AQ9H1F0 79 aa10.96□□□□□ -0.65
UBE4B-201ENST00000253251 LINC01620Q4KN68 170 aa10.96□□□□□ -0.66
UBE4B-201ENST00000253251 UBE2D3P61077 147 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 UBE2D2P62837 147 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 IGHV4-30-4P0DP06 118 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 PROK1P58294 105 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 TAX1BP3O14907 124 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
UBE4B-201ENST00000253251 H3BT86 120 aa10.94□□□□□ -0.66
UBE4B-201ENST00000253251 TIMM17BO60830 172 aa10.94□□□□□ -0.66
UBE4B-201ENST00000253251 RBX1P62877 108 aa10.94□□□□□ -0.66
UBE4B-201ENST00000253251 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
UBE4B-201ENST00000253251 DAND5Q8N907 189 aa10.93□□□□□ -0.66
UBE4B-201ENST00000253251 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
UBE4B-201ENST00000253251 EDN2P20800 178 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 DOPEY1Q5JWR5 2465 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 JMJD7-PLA2G4BH0Y9G9 81 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 CD164L2Q6UWJ8 174 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 USP9YO00507 2555 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-201ENST00000253251 KPRPQ5T749 579 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-201ENST00000253251 MUC7Q8TAX7 377 aa10.92□□□□□ -0.66
UBE4B-201ENST00000253251 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
UBE4B-201ENST00000253251 BEAN1Q3B7T3 259 aa10.91□□□□□ -0.66
UBE4B-201ENST00000253251 FUSP35637 526 aaKnown RBP eCLIP10.9□□□□□ -0.661e-5■■■□□ 16.6
UBE4B-201ENST00000253251 TEN1Q86WV5 123 aa10.9□□□□□ -0.66
UBE4B-201ENST00000253251 TRBV10-2A0A0K0K1G8 114 aa10.9□□□□□ -0.66
UBE4B-201ENST00000253251 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.66
UBE4B-201ENST00000253251 ABCA12Q86UK0 2595 aa10.9□□□□□ -0.67
UBE4B-201ENST00000253251 HAMPP81172 84 aa10.89□□□□□ -0.67
UBE4B-201ENST00000253251 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
UBE4B-201ENST00000253251 TP73-AS1Q9UF72 201 aa10.89□□□□□ -0.67
UBE4B-201ENST00000253251 NCR3O14931 201 aa10.88□□□□□ -0.67
UBE4B-201ENST00000253251 SORL1Q92673 2214 aa10.88□□□□□ -0.67
UBE4B-201ENST00000253251 FSHBP01225 129 aa10.88□□□□□ -0.67
UBE4B-201ENST00000253251 PDE6GP18545 87 aa10.88□□□□□ -0.67
UBE4B-201ENST00000253251 RNASE8Q8TDE3 154 aaKnown RBP10.87□□□□□ -0.67
UBE4B-201ENST00000253251 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
UBE4B-201ENST00000253251 Q8N976 141 aa10.87□□□□□ -0.67
UBE4B-201ENST00000253251 RNF183Q96D59 192 aa10.87□□□□□ -0.67
UBE4B-201ENST00000253251 PKD1L2Q7Z442 2459 aa10.87□□□□□ -0.67
UBE4B-201ENST00000253251 COX7BP24311 80 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 UBE2D1P51668 147 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 LRRK2Q5S007 2527 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 TMEM256-PLSCR3K7ERE1 68 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 LINC00959A0A1B0GUT2 108 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 LECT2O14960 151 aa10.86□□□□□ -0.67
UBE4B-201ENST00000253251 UBE2AP49459 152 aa10.85□□□□□ -0.67
UBE4B-201ENST00000253251 CDC42SE2Q9NRR3 84 aa10.85□□□□□ -0.67
UBE4B-201ENST00000253251 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
UBE4B-201ENST00000253251 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
UBE4B-201ENST00000253251 CSDC2Q9Y534 153 aaKnown RBP10.84□□□□□ -0.67
UBE4B-201ENST00000253251 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
UBE4B-201ENST00000253251 DEFB105AQ8NG35 78 aa10.84□□□□□ -0.67
UBE4B-201ENST00000253251 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
UBE4B-201ENST00000253251 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
UBE4B-201ENST00000253251 FHL3Q13643 280 aa10.83□□□□□ -0.68
UBE4B-201ENST00000253251 MAPKAPK5-AS1Q8N8E1 139 aa10.83□□□□□ -0.68
UBE4B-201ENST00000253251 PRM2P04554 102 aa10.82□□□□□ -0.68
UBE4B-201ENST00000253251 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
UBE4B-201ENST00000253251 LINC00310P59036 64 aa10.82□□□□□ -0.68
UBE4B-201ENST00000253251 COX17Q14061 63 aa10.81□□□□□ -0.68
UBE4B-201ENST00000253251 URB1-AS1Q96HZ7 61 aa10.81□□□□□ -0.68
UBE4B-201ENST00000253251 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
UBE4B-201ENST00000253251 Q8IZM0 81 aa10.81□□□□□ -0.68
UBE4B-201ENST00000253251 JMJD1CQ15652 2540 aa10.8□□□□□ -0.68
UBE4B-201ENST00000253251 A0A0J9YWU9 116 aa10.8□□□□□ -0.68
UBE4B-201ENST00000253251 FHL2Q14192 279 aa10.8□□□□□ -0.68
UBE4B-201ENST00000253251 CLEC2BQ92478 149 aa10.79□□□□□ -0.68
UBE4B-201ENST00000253251 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
UBE4B-201ENST00000253251 FAM19A4Q96LR4 140 aa10.79□□□□□ -0.68
UBE4B-201ENST00000253251 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
UBE4B-201ENST00000253251 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
UBE4B-201ENST00000253251 RBM3P98179 157 aaKnown RBP10.78□□□□□ -0.68
UBE4B-201ENST00000253251 WFDC2Q14508 124 aa10.78□□□□□ -0.68
UBE4B-201ENST00000253251 TRACP01848 142 aa10.78□□□□□ -0.68
UBE4B-201ENST00000253251 hADV29S1A0JD25 119 aa10.78□□□□□ -0.68
UBE4B-201ENST00000253251 NUPR2A6NF83 97 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms