RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FAM110AQ9BQ89 295 aa13.75□□□□□ -0.21
SNX4-201ENST00000251775 SMIM20Q8N5G0 67 aa13.75□□□□□ -0.21
SNX4-201ENST00000251775 PROK1P58294 105 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 DEFB131AP59861 70 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 TRGV11A0A075B6L2 103 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 HIST2H2BDQ6DRA6 164 aa13.74□□□□□ -0.21
SNX4-201ENST00000251775 MEIG1Q5JSS6 88 aa13.73□□□□□ -0.21
SNX4-201ENST00000251775 LRRC75A-AS1Q8N1F1 130 aa13.73□□□□□ -0.21
SNX4-201ENST00000251775 EDA2RQ9HAV5 297 aa13.73□□□□□ -0.21
SNX4-201ENST00000251775 TRBV7-7A0A0K0K1E9 115 aa13.72□□□□□ -0.21
SNX4-201ENST00000251775 KRTAP1-3Q8IUG1 177 aa13.72□□□□□ -0.21
SNX4-201ENST00000251775 CHCHD5Q9BSY4 110 aa13.72□□□□□ -0.21
SNX4-201ENST00000251775 SPANXA1Q9NS26 97 aa13.72□□□□□ -0.21
SNX4-201ENST00000251775 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
SNX4-201ENST00000251775 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
SNX4-201ENST00000251775 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
SNX4-201ENST00000251775 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
SNX4-201ENST00000251775 HTN1P15515 57 aa13.71□□□□□ -0.21
SNX4-201ENST00000251775 DAND5Q8N907 189 aa13.71□□□□□ -0.21
SNX4-201ENST00000251775 Q9UF83 564 aa13.71□□□□□ -0.21
SNX4-201ENST00000251775 HERV-K104P63124 156 aa13.71□□□□□ -0.21
SNX4-201ENST00000251775 PRM2P04554 102 aa13.7□□□□□ -0.22
SNX4-201ENST00000251775 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
SNX4-201ENST00000251775 TIMM17BO60830 172 aa13.7□□□□□ -0.22
SNX4-201ENST00000251775 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
SNX4-201ENST00000251775 A8MTW9 85 aa13.69□□□□□ -0.22
SNX4-201ENST00000251775 KHDC1LQ5JSQ8 128 aa13.69□□□□□ -0.22
SNX4-201ENST00000251775 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
SNX4-201ENST00000251775 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
SNX4-201ENST00000251775 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
SNX4-201ENST00000251775 TNFRSF18Q9Y5U5 241 aa13.68□□□□□ -0.22
SNX4-201ENST00000251775 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
SNX4-201ENST00000251775 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
SNX4-201ENST00000251775 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
SNX4-201ENST00000251775 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
SNX4-201ENST00000251775 MYO9AB2RTY4 2548 aa13.67□□□□□ -0.22
SNX4-201ENST00000251775 TLN2Q9Y4G6 2542 aa13.66□□□□□ -0.22
SNX4-201ENST00000251775 Q6ZSN1 163 aa13.66□□□□□ -0.22
SNX4-201ENST00000251775 MAP6D1Q9H9H5 199 aa13.66□□□□□ -0.22
SNX4-201ENST00000251775 CDKN2A-AS1Q9UH64 79 aa13.66□□□□□ -0.22
SNX4-201ENST00000251775 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
SNX4-201ENST00000251775 NDUFA1O15239 70 aa13.65□□□□□ -0.22
SNX4-201ENST00000251775 LINC01587Q99440 93 aa13.65□□□□□ -0.22
SNX4-201ENST00000251775 LINC00467Q9BRT7 94 aa13.65□□□□□ -0.22
SNX4-201ENST00000251775 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
SNX4-201ENST00000251775 C3orf56Q8N813 242 aa13.64□□□□□ -0.23
SNX4-201ENST00000251775 DYNLRB2Q8TF09 96 aa13.64□□□□□ -0.23
SNX4-201ENST00000251775 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
SNX4-201ENST00000251775 DEFB114Q30KQ6 69 aa13.63□□□□□ -0.23
SNX4-201ENST00000251775 APCP25054 2843 aa13.63□□□□□ -0.23
SNX4-201ENST00000251775 FAM236AA0A1B0GUQ0 79 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 FAM236BA0A1B0GV22 79 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 ACYP1P07311 99 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 LINC00308Q8TCZ7 52 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 SMCR5Q8TEV8 140 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 IGLV5-45A0A087WSX0 123 aa13.62□□□□□ -0.23
SNX4-201ENST00000251775 SONP18583 2426 aaKnown RBP13.62□□□□□ -0.23
SNX4-201ENST00000251775 COX7A2LO14548 114 aa13.61□□□□□ -0.23
SNX4-201ENST00000251775 WFDC11Q8NEX6 87 aa13.61□□□□□ -0.23
SNX4-201ENST00000251775 IMUPQ9GZP8 106 aa13.61□□□□□ -0.23
SNX4-201ENST00000251775 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
SNX4-201ENST00000251775 TIRAPP58753 221 aa13.6□□□□□ -0.23
SNX4-201ENST00000251775 ITPR3Q14573 2671 aa13.6□□□□□ -0.23
SNX4-201ENST00000251775 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
SNX4-201ENST00000251775 EPG5Q9HCE0 2579 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 COX6A2Q02221 97 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 TMEM86BQ8N661 226 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 TMEM126AQ9H061 195 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 Q9H8V8 135 aa13.59□□□□□ -0.23
SNX4-201ENST00000251775 DNAJC9-AS1A6NH13 148 aa13.58□□□□□ -0.23
SNX4-201ENST00000251775 SOSTDC1Q6X4U4 206 aa13.58□□□□□ -0.23
SNX4-201ENST00000251775 C11orf44Q8N8P7 122 aa13.58□□□□□ -0.23
SNX4-201ENST00000251775 C11orf72Q8NBR9 251 aa13.58□□□□□ -0.23
SNX4-201ENST00000251775 A0A0U1RRA0 63 aa13.58□□□□□ -0.24
SNX4-201ENST00000251775 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.24
SNX4-201ENST00000251775 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.24
SNX4-201ENST00000251775 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
SNX4-201ENST00000251775 BEAN1Q3B7T3 259 aa13.57□□□□□ -0.24
SNX4-201ENST00000251775 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
SNX4-201ENST00000251775 HIST2H2BCQ6DN03 193 aa13.56□□□□□ -0.24
SNX4-201ENST00000251775 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
SNX4-201ENST00000251775 DAZ4Q86SG3 579 aaKnown RBP13.56□□□□□ -0.24
SNX4-201ENST00000251775 DAZ3Q9NR90 486 aaKnown RBP13.56□□□□□ -0.24
SNX4-201ENST00000251775 A0A1W2PRX2 142 aa13.56□□□□□ -0.24
SNX4-201ENST00000251775 LINC00643Q86TS7 51 aa13.56□□□□□ -0.24
SNX4-201ENST00000251775 ESM1Q9NQ30 184 aa13.56□□□□□ -0.24
SNX4-201ENST00000251775 IGHV3OR16-12A0A075B7B8 117 aa13.55□□□□□ -0.24
SNX4-201ENST00000251775 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
SNX4-201ENST00000251775 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
SNX4-201ENST00000251775 SDIM1Q6ZPB5 146 aa13.55□□□□□ -0.24
SNX4-201ENST00000251775 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
SNX4-201ENST00000251775 INSP01308 110 aa13.54□□□□□ -0.24
SNX4-201ENST00000251775 CHD6Q8TD26 2715 aa13.54□□□□□ -0.24
SNX4-201ENST00000251775 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
SNX4-201ENST00000251775 LINC00242Q5T6M2 205 aa13.53□□□□□ -0.24
SNX4-201ENST00000251775 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
SNX4-201ENST00000251775 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms