RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 TMEM141Q96I45 108 aa10.59□□□□□ -0.71
MBD4-201ENST00000249910 FXYD2P54710 66 aa10.59□□□□□ -0.71
MBD4-201ENST00000249910 LINC00482Q8N8I6 264 aa10.59□□□□□ -0.71
MBD4-201ENST00000249910 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
MBD4-201ENST00000249910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
MBD4-201ENST00000249910 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
MBD4-201ENST00000249910 RS1O15537 224 aa10.58□□□□□ -0.72
MBD4-201ENST00000249910 PIK3CD-AS1Q5SR53 167 aa10.58□□□□□ -0.72
MBD4-201ENST00000249910 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
MBD4-201ENST00000249910 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
MBD4-201ENST00000249910 FOXI1Q12951 378 aa10.57□□□□□ -0.72
MBD4-201ENST00000249910 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
MBD4-201ENST00000249910 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
MBD4-201ENST00000249910 E9PLD3 99 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 RHODO00212 210 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 IL17DQ8TAD2 202 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 TMEM126AQ9H061 195 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 PLAC8L1A1L4L8 177 aa10.56□□□□□ -0.72
MBD4-201ENST00000249910 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 APOMO95445 188 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
MBD4-201ENST00000249910 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 HIGD1BQ9P298 99 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 LINC01549A6NIU2 74 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 K7ERJ3 54 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
MBD4-201ENST00000249910 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
MBD4-201ENST00000249910 PRO0461Q9UI25 63 aa10.54□□□□□ -0.72
MBD4-201ENST00000249910 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
MBD4-201ENST00000249910 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
MBD4-201ENST00000249910 TSPEAR-AS2P59090 65 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 SLC25A29Q8N8R3 303 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 F8WDY8 70 aa10.53□□□□□ -0.72
MBD4-201ENST00000249910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
MBD4-201ENST00000249910 FBN1P35555 2871 aaKnown RBP10.53□□□□□ -0.72
MBD4-201ENST00000249910 RRN3P1Q2M238 152 aa10.52□□□□□ -0.72
MBD4-201ENST00000249910 HIST1H4GQ99525 98 aa10.52□□□□□ -0.72
MBD4-201ENST00000249910 H3BMG7 143 aa10.52□□□□□ -0.73
MBD4-201ENST00000249910 CRLF1O75462 422 aa10.52□□□□□ -0.73
MBD4-201ENST00000249910 SCGB1D4Q6XE38 83 aa10.52□□□□□ -0.73
MBD4-201ENST00000249910 CEND1Q8N111 149 aa10.52□□□□□ -0.73
MBD4-201ENST00000249910 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
MBD4-201ENST00000249910 PKD1L1Q8TDX9 2849 aa10.52□□□□□ -0.73
MBD4-201ENST00000249910 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
MBD4-201ENST00000249910 A0A1B0GWB2 263 aa10.51□□□□□ -0.73
MBD4-201ENST00000249910 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
MBD4-201ENST00000249910 UBE2D4Q9Y2X8 147 aa10.51□□□□□ -0.73
MBD4-201ENST00000249910 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
MBD4-201ENST00000249910 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
MBD4-201ENST00000249910 C16orf74Q96GX8 76 aa10.5□□□□□ -0.73
MBD4-201ENST00000249910 ANK2Q01484 3957 aa10.5□□□□□ -0.73
MBD4-201ENST00000249910 MEIG1Q5JSS6 88 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 MAST4O15021 2626 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 K7EQD1 137 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 LINC00694P0DN24 101 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
MBD4-201ENST00000249910 HERVK_113P61574 105 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
MBD4-201ENST00000249910 IFITM1P13164 125 aa10.48□□□□□ -0.73
MBD4-201ENST00000249910 AMELXQ99217 191 aa10.48□□□□□ -0.73
MBD4-201ENST00000249910 DEFB130BP0DP73 79 aa10.48□□□□□ -0.73
MBD4-201ENST00000249910 DEFB130AP0DP74 79 aa10.48□□□□□ -0.73
MBD4-201ENST00000249910 NTM-AS1Q6ZSK4 140 aa10.48□□□□□ -0.73
MBD4-201ENST00000249910 J3QQQ9 107 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
MBD4-201ENST00000249910 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
MBD4-201ENST00000249910 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
MBD4-201ENST00000249910 TMEM223A0PJW6 202 aa10.46□□□□□ -0.73
MBD4-201ENST00000249910 A8MZ25 164 aa10.46□□□□□ -0.73
MBD4-201ENST00000249910 SRSF9Q13242 221 aaKnown RBP eCLIP10.46□□□□□ -0.73
MBD4-201ENST00000249910 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
MBD4-201ENST00000249910 TRGV4A0A0C4DH28 118 aa10.45□□□□□ -0.74
MBD4-201ENST00000249910 IGLL5B9A064 214 aa10.45□□□□□ -0.74
MBD4-201ENST00000249910 DEFB4AO15263 64 aa10.45□□□□□ -0.74
MBD4-201ENST00000249910 A0A0J9YY99 117 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
MBD4-201ENST00000249910 UBE2D3P61077 147 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 UBE2D2P62837 147 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
MBD4-201ENST00000249910 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 OVOL2Q9BRP0 275 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 F5H768 121 aa10.44□□□□□ -0.74
MBD4-201ENST00000249910 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
MBD4-201ENST00000249910 Q6Q795 121 aa10.43□□□□□ -0.74
MBD4-201ENST00000249910 DEFB135Q30KP9 77 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms