RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
SIN3B-201ENST00000248054 TMEM256-PLSCR3K7ERE1 68 aa11.69□□□□□ -0.54
SIN3B-201ENST00000248054 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
SIN3B-201ENST00000248054 NDUFA1O15239 70 aa11.69□□□□□ -0.54
SIN3B-201ENST00000248054 PTPN13Q12923 2485 aa11.68□□□□□ -0.54
SIN3B-201ENST00000248054 TRANK1O15050 2925 aa11.68□□□□□ -0.54
SIN3B-201ENST00000248054 IGKV2D-24A0A075B6R9 120 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 P0DMU3 169 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 A0A1B0GX51 115 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 hADV29S1A0JD25 119 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
SIN3B-201ENST00000248054 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 ETDCA0A1B0GVM5 59 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 M0QY20 66 aa11.67□□□□□ -0.54
SIN3B-201ENST00000248054 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
SIN3B-201ENST00000248054 HIST2H2BDQ6DRA6 164 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 GAS8-AS1O95177 125 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 TRBV27A0A0K0K1C4 114 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 LECT2O14960 151 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
SIN3B-201ENST00000248054 PRR9Q5T870 116 aa11.65□□□□□ -0.54
SIN3B-201ENST00000248054 Q6ZTI0 123 aa11.65□□□□□ -0.54
SIN3B-201ENST00000248054 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.54
SIN3B-201ENST00000248054 C16orf95Q9H693 158 aa11.65□□□□□ -0.54
SIN3B-201ENST00000248054 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
SIN3B-201ENST00000248054 DAND5Q8N907 189 aa11.64□□□□□ -0.55
SIN3B-201ENST00000248054 TIRAPP58753 221 aa11.64□□□□□ -0.55
SIN3B-201ENST00000248054 NRACQ8N912 160 aa11.64□□□□□ -0.55
SIN3B-201ENST00000248054 UQCRQO14949 82 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 LINC00694P0DN24 101 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
SIN3B-201ENST00000248054 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 TIMM17BO60830 172 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 C3orf22Q8N5N4 141 aa11.63□□□□□ -0.55
SIN3B-201ENST00000248054 SPAG11BQ08648 103 aa11.62□□□□□ -0.55
SIN3B-201ENST00000248054 MIFP14174 115 aa11.62□□□□□ -0.55
SIN3B-201ENST00000248054 CCL18P55774 89 aa11.62□□□□□ -0.55
SIN3B-201ENST00000248054 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 NREPQ16612 68 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 ATP5EP2Q5VTU8 51 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 BBC3Q96PG8 261 aaPredicted RBP11.61□□□□□ -0.55
SIN3B-201ENST00000248054 Q6Q795 121 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 PRO0461Q9UI25 63 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 IGKV3D-7A0A0C4DH55 119 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 C18orf65Q6ZTR6 163 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
SIN3B-201ENST00000248054 KIR2DL5BQ8NHK3 375 aa11.6□□□□□ -0.55
SIN3B-201ENST00000248054 UBE2BP63146 152 aa11.59□□□□□ -0.55
SIN3B-201ENST00000248054 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
SIN3B-201ENST00000248054 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.55
SIN3B-201ENST00000248054 AGRNO00468 2067 aa11.58□□□□□ -0.56
SIN3B-201ENST00000248054 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
SIN3B-201ENST00000248054 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
SIN3B-201ENST00000248054 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
SIN3B-201ENST00000248054 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
SIN3B-201ENST00000248054 UBE2D3P61077 147 aa11.58□□□□□ -0.56
SIN3B-201ENST00000248054 UBE2D2P62837 147 aa11.58□□□□□ -0.56
SIN3B-201ENST00000248054 MP68P56378 58 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 Q8N2B8 174 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 IGHV3-30P01768 117 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 IGHV3-30-5P0DP03 117 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
SIN3B-201ENST00000248054 CRYGDP07320 174 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
SIN3B-201ENST00000248054 UBE2D1P51668 147 aa11.56□□□□□ -0.56
SIN3B-201ENST00000248054 PRRC2AP48634 2157 aaKnown RBP11.56□□□□□ -0.56
SIN3B-201ENST00000248054 TRIAP1O43715 76 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 LINC00467Q9BRT7 94 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 SZT2Q5T011 3432 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 PRUNE2Q8WUY3 3088 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 KLK9Q2XQG4 91 aa11.55□□□□□ -0.56
SIN3B-201ENST00000248054 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 NCR3O14931 201 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 COX7BP24311 80 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
SIN3B-201ENST00000248054 NDUFB1O75438 58 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 IMUPQ9GZP8 106 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 SPTBN4Q9H254 2564 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 IGLV1-51P01701 117 aa11.54□□□□□ -0.56
SIN3B-201ENST00000248054 TSHBP01222 138 aa11.53□□□□□ -0.56
SIN3B-201ENST00000248054 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
SIN3B-201ENST00000248054 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
SIN3B-201ENST00000248054 DEFB4AO15263 64 aa11.53□□□□□ -0.56
SIN3B-201ENST00000248054 NDUFC2O95298 119 aa11.52□□□□□ -0.56
SIN3B-201ENST00000248054 Q9HAA7 133 aa11.52□□□□□ -0.56
SIN3B-201ENST00000248054 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
SIN3B-201ENST00000248054 TET2Q6N021 2002 aaPredicted RBP11.52□□□□□ -0.57
SIN3B-201ENST00000248054 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms