RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 X6R8D5 127 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 J3QQQ9 107 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 PTH2Q96A98 100 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 VPS25Q9BRG1 176 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 VCX2Q9H322 139 aa12.08□□□□□ -0.48
CDKN1A-201ENST00000244741 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 RNF183Q96D59 192 aa12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 OVOL2Q9BRP0 275 aa12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
CDKN1A-201ENST00000244741 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
CDKN1A-201ENST00000244741 PCP4P48539 62 aa12.06□□□□□ -0.48
CDKN1A-201ENST00000244741 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
CDKN1A-201ENST00000244741 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
CDKN1A-201ENST00000244741 DNAH9Q9NYC9 4486 aa12.06□□□□□ -0.48
CDKN1A-201ENST00000244741 UBE2D1P51668 147 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 TMEM238LA0A1B0GVL6 79 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 A6NJY4 79 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 RHODO00212 210 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
CDKN1A-201ENST00000244741 H3BMG7 143 aa12.04□□□□□ -0.48
CDKN1A-201ENST00000244741 LEPROTO15243 131 aa12.04□□□□□ -0.48
CDKN1A-201ENST00000244741 SPXQ9BT56 116 aa12.04□□□□□ -0.48
CDKN1A-201ENST00000244741 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 TMEM263Q8WUH6 116 aaKnown RBP12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 SPANXB1Q9NS25 103 aaPredicted RBP12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 PLAC8L1A1L4L8 177 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 C21orf62-AS1Q17RA5 79 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
CDKN1A-201ENST00000244741 RS1O15537 224 aa12.02□□□□□ -0.49
CDKN1A-201ENST00000244741 IGHV3-53P01767 116 aa12.02□□□□□ -0.49
CDKN1A-201ENST00000244741 WFDC2Q14508 124 aa12.02□□□□□ -0.49
CDKN1A-201ENST00000244741 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
CDKN1A-201ENST00000244741 APOMO95445 188 aa12.01□□□□□ -0.49
CDKN1A-201ENST00000244741 C16orf74Q96GX8 76 aa12.01□□□□□ -0.49
CDKN1A-201ENST00000244741 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
CDKN1A-201ENST00000244741 RPL24P83731 157 aaKnown RBP12.01□□□□□ -0.49
CDKN1A-201ENST00000244741 Q8NAQ8 132 aa12.01□□□□□ -0.49
CDKN1A-201ENST00000244741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
CDKN1A-201ENST00000244741 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
CDKN1A-201ENST00000244741 F8W1H4 67 aa12□□□□□ -0.49
CDKN1A-201ENST00000244741 TSPAN13O95857 204 aa12□□□□□ -0.49
CDKN1A-201ENST00000244741 FBN3Q75N90 2809 aa12□□□□□ -0.49
CDKN1A-201ENST00000244741 TRGV1A0A0A0MS02 117 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 MRPS36P82909 103 aaKnown RBP11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 Q6ZTI0 123 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 TM2D3Q9BRN9 247 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 CRYBA4P53673 196 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 DNAJC30Q96LL9 226 aa11.99□□□□□ -0.49
CDKN1A-201ENST00000244741 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 CFC1P0CG37 223 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 SPATA25Q9BR10 227 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 STAB2Q8WWQ8 2551 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 SMIM9A6NGZ8 99 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 PRO0461Q9UI25 63 aa11.98□□□□□ -0.49
CDKN1A-201ENST00000244741 MIFP14174 115 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 GAGE13Q4V321 117 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 IL17DQ8TAD2 202 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 B9D2Q9BPU9 175 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 SPANXA1Q9NS26 97 aa11.97□□□□□ -0.49
CDKN1A-201ENST00000244741 GAGE7O76087 117 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 COTL1Q14019 142 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 CELA1Q9UNI1 258 aa11.96□□□□□ -0.49
CDKN1A-201ENST00000244741 FAM222AQ5U5X8 452 aa11.96□□□□□ -0.5
CDKN1A-201ENST00000244741 TRAV8-3A0A0A6YYJ7 113 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 A0A0J9YWU9 116 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 Q6ZUT4 128 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 TGP01266 2768 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 LOC107984156A0A0G2JMH3 177 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 SH2D6Q7Z4S9 175 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 ARL17AQ8IVW1 177 aa11.95□□□□□ -0.5
CDKN1A-201ENST00000244741 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 UBE2D3P61077 147 aa11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 UBE2D2P62837 147 aa11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 A4D1N5 150 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms