RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 FAM110AQ9BQ89 295 aa15.78■□□□□ 0.12
RNF39-201ENST00000244360 UNC79Q9P2D8 2635 aa15.78■□□□□ 0.12
RNF39-201ENST00000244360 ADARB2-AS1A8MUL3 147 aa15.78■□□□□ 0.12
RNF39-201ENST00000244360 HELZ2Q9BYK8 2649 aaKnown RBP15.77■□□□□ 0.12
RNF39-201ENST00000244360 WNK1Q9H4A3 2382 aa15.77■□□□□ 0.11
RNF39-201ENST00000244360 IGLV1-51P01701 117 aa15.76■□□□□ 0.11
RNF39-201ENST00000244360 UBE2D4Q9Y2X8 147 aa15.76■□□□□ 0.11
RNF39-201ENST00000244360 CUBNO60494 3623 aa15.75■□□□□ 0.11
RNF39-201ENST00000244360 EIF4EBP3O60516 100 aaPredicted RBP15.75■□□□□ 0.11
RNF39-201ENST00000244360 SPANXDQ9BXN6 97 aa15.75■□□□□ 0.11
RNF39-201ENST00000244360 SPANXCQ9NY87 97 aa15.75■□□□□ 0.11
RNF39-201ENST00000244360 IGHV3OR16-12A0A075B7B8 117 aa15.75■□□□□ 0.11
RNF39-201ENST00000244360 GIG44P09565 113 aaPredicted RBP15.74■□□□□ 0.11
RNF39-201ENST00000244360 CEMP1Q6PRD7 247 aaPredicted RBP15.74■□□□□ 0.11
RNF39-201ENST00000244360 CARD19Q96LW7 228 aa15.74■□□□□ 0.11
RNF39-201ENST00000244360 CDIP1Q9H305 208 aa15.74■□□□□ 0.11
RNF39-201ENST00000244360 MTORP42345 2549 aa15.74■□□□□ 0.11
RNF39-201ENST00000244360 LITAFQ99732 161 aa15.74■□□□□ 0.11
RNF39-201ENST00000244360 C19orf73Q9NVV2 129 aa15.74■□□□□ 0.11
RNF39-201ENST00000244360 VSIG2Q96IQ7 327 aa15.73■□□□□ 0.11
RNF39-201ENST00000244360 TRGV1A0A0A0MS02 117 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 A0A1B0GV72 72 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 SLC25A20O43772 301 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 Q1RN00 199 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 ANKRD29Q8N6D5 301 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 NDUFA12Q9UI09 145 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 ATXN8Q156A1 80 aa15.72■□□□□ 0.11
RNF39-201ENST00000244360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.71■□□□□ 0.1
RNF39-201ENST00000244360 TRBV30A0A0K0K1B3 111 aa15.71■□□□□ 0.1
RNF39-201ENST00000244360 IGKV2-29A2NJV5 120 aaPredicted RBP15.71■□□□□ 0.1
RNF39-201ENST00000244360 TRAV8-3A0A0A6YYJ7 113 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 IGHV3-38A0A0C4DH36 116 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 RNF183Q96D59 192 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 SETD2Q9BYW2 2564 aaPredicted RBP15.7■□□□□ 0.1
RNF39-201ENST00000244360 C9JAW5 83 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 Q6ZTI0 123 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 LINC01600Q96MT4 127 aa15.7■□□□□ 0.1
RNF39-201ENST00000244360 TRAV4A0A0B4J268 109 aa15.69■□□□□ 0.1
RNF39-201ENST00000244360 TMEM262E9PQX1 116 aa15.69■□□□□ 0.1
RNF39-201ENST00000244360 CIDEAO60543 219 aa15.69■□□□□ 0.1
RNF39-201ENST00000244360 TIMM17BO60830 172 aa15.69■□□□□ 0.1
RNF39-201ENST00000244360 DAZ2Q13117 558 aaKnown RBP15.69■□□□□ 0.1
RNF39-201ENST00000244360 MIAQ16674 131 aa15.69■□□□□ 0.1
RNF39-201ENST00000244360 GEMIN7Q9H840 131 aaKnown RBP15.69■□□□□ 0.1
RNF39-201ENST00000244360 TRBV10-1A0A0K0K1A3 114 aa15.68■□□□□ 0.1
RNF39-201ENST00000244360 H7C2G1 150 aa15.68■□□□□ 0.1
RNF39-201ENST00000244360 ZFAND6Q6FIF0 208 aa15.68■□□□□ 0.1
RNF39-201ENST00000244360 Q6ZUT4 128 aa15.68■□□□□ 0.1
RNF39-201ENST00000244360 WFDC10AQ9H1F0 79 aa15.68■□□□□ 0.1
RNF39-201ENST00000244360 TIRAPP58753 221 aa15.67■□□□□ 0.1
RNF39-201ENST00000244360 RNASE13Q5GAN3 156 aaKnown RBP15.67■□□□□ 0.1
RNF39-201ENST00000244360 SETXQ7Z333 2677 aaKnown RBP15.67■□□□□ 0.1
RNF39-201ENST00000244360 PLAC8L1A1L4L8 177 aa15.66■□□□□ 0.1
RNF39-201ENST00000244360 K7EQD1 137 aa15.66■□□□□ 0.1
RNF39-201ENST00000244360 IGLV5-45A0A087WSX0 123 aa15.66■□□□□ 0.1
RNF39-201ENST00000244360 PRSS2P07478 247 aa15.66■□□□□ 0.1
RNF39-201ENST00000244360 C16orf74Q96GX8 76 aa15.66■□□□□ 0.1
RNF39-201ENST00000244360 SPINK8P0C7L1 97 aa15.65■□□□□ 0.1
RNF39-201ENST00000244360 IFITM1P13164 125 aa15.65■□□□□ 0.1
RNF39-201ENST00000244360 LINC01620Q4KN68 170 aa15.65■□□□□ 0.1
RNF39-201ENST00000244360 CSNK1G2-AS1Q8NCQ2 148 aa15.65■□□□□ 0.1
RNF39-201ENST00000244360 SMR3AQ99954 134 aa15.64■□□□□ 0.09
RNF39-201ENST00000244360 RPL36AP83881 106 aaKnown RBP15.64■□□□□ 0.09
RNF39-201ENST00000244360 RPL36ALQ969Q0 106 aaKnown RBP15.64■□□□□ 0.09
RNF39-201ENST00000244360 NOP10Q9NPE3 64 aaKnown RBP15.64■□□□□ 0.09
RNF39-201ENST00000244360 ADAMTSL4-AS1Q5T5F5 129 aa15.63■□□□□ 0.09
RNF39-201ENST00000244360 TRIAP1O43715 76 aa15.63■□□□□ 0.09
RNF39-201ENST00000244360 ICOSQ9Y6W8 199 aa15.63■□□□□ 0.09
RNF39-201ENST00000244360 NIPBLQ6KC79 2804 aaeCLIP15.62■□□□□ 0.09
RNF39-201ENST00000244360 COX6CP09669 75 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 RPL35AP18077 110 aaKnown RBP15.62■□□□□ 0.09
RNF39-201ENST00000244360 DAZ4Q86SG3 579 aaKnown RBP15.62■□□□□ 0.09
RNF39-201ENST00000244360 DAZ3Q9NR90 486 aaKnown RBP15.62■□□□□ 0.09
RNF39-201ENST00000244360 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
RNF39-201ENST00000244360 TRBV10-2A0A0K0K1G8 114 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 NDUFA1O15239 70 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 XGP55808 180 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 KRTAP10-3P60369 221 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 DGAT2L7PQ6IED9 249 aa15.62■□□□□ 0.09
RNF39-201ENST00000244360 JMJD1CQ15652 2540 aa15.61■□□□□ 0.09
RNF39-201ENST00000244360 MT-ATP8P03928 68 aa15.6■□□□□ 0.09
RNF39-201ENST00000244360 CKS1BP61024 79 aa15.6■□□□□ 0.09
RNF39-201ENST00000244360 OVOL2Q9BRP0 275 aa15.6■□□□□ 0.09
RNF39-201ENST00000244360 HERVK_113P63121 156 aa15.6■□□□□ 0.09
RNF39-201ENST00000244360 HIVEP2P31629 2446 aa15.59■□□□□ 0.09
RNF39-201ENST00000244360 NTM-AS1Q6ZSK4 140 aa15.59■□□□□ 0.09
RNF39-201ENST00000244360 CDKN2A-AS1Q9UH64 79 aa15.59■□□□□ 0.09
RNF39-201ENST00000244360 CSDC2Q9Y534 153 aaKnown RBP15.59■□□□□ 0.09
RNF39-201ENST00000244360 RPL13AP40429 203 aaKnown RBP15.59■□□□□ 0.09
RNF39-201ENST00000244360 CIRBPQ14011 172 aaKnown RBP15.59■□□□□ 0.09
RNF39-201ENST00000244360 FAM19A3Q7Z5A8 133 aa15.59■□□□□ 0.09
RNF39-201ENST00000244360 LY6G6DO95868 133 aa15.58■□□□□ 0.08
RNF39-201ENST00000244360 A8MZ25 164 aa15.57■□□□□ 0.08
RNF39-201ENST00000244360 LINC00482Q8N8I6 264 aa15.57■□□□□ 0.08
RNF39-201ENST00000244360 TMEM101Q96IK0 257 aa15.57■□□□□ 0.08
RNF39-201ENST00000244360 LINC00694P0DN24 101 aa15.56■□□□□ 0.08
RNF39-201ENST00000244360 NTN5Q8WTR8 489 aaPredicted RBP15.56■□□□□ 0.08
RNF39-201ENST00000244360 COPS9Q8WXC6 57 aa15.56■□□□□ 0.08
RNF39-201ENST00000244360 GAGE12JA6NER3 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 H3BT86 120 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms