RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 C11orf72Q8NBR9 251 aa5.65□□□□□ -1.51
CXCR4-201ENST00000241393 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.51
CXCR4-201ENST00000241393 PRO0461Q9UI25 63 aa5.65□□□□□ -1.51
CXCR4-201ENST00000241393 PTPN13Q12923 2485 aa5.65□□□□□ -1.51
CXCR4-201ENST00000241393 NAV2Q8IVL1 2488 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 RS1O15537 224 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 CD28P10747 220 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
CXCR4-201ENST00000241393 UBE2D3P61077 147 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 UBE2D2P62837 147 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 CFAP126Q5VTH2 177 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 NDUFA11Q86Y39 141 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 CELSR1Q9NYQ6 3014 aa5.64□□□□□ -1.51
CXCR4-201ENST00000241393 TRBV20-1A0A075B6N2 111 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TEX48A0A1B0GUV7 120 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 H3BMG7 143 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TSPAN13O95857 204 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 COTL1Q14019 142 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 C10orf126Q8N4M7 172 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 ATP6V0E2Q8NHE4 81 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 LINC01587Q99440 93 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TIMM21Q9BVV7 248 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 SORL1Q92673 2214 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 A0A0B4J2C4 111 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 A0A0J9YXV3 536 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 WFDC2Q14508 124 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
CXCR4-201ENST00000241393 CHCHD7Q9BUK0 85 aa5.63□□□□□ -1.51
CXCR4-201ENST00000241393 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.62□□□□□ -1.51
CXCR4-201ENST00000241393 CFC1BP0CG36 223 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 CFC1P0CG37 223 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 HTN1P15515 57 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 DEFB104AQ8WTQ1 72 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 FAM104AQ969W3 186 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 PRO1854Q9UHT4 67 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 CELSR2Q9HCU4 2923 aa5.62□□□□□ -1.51
CXCR4-201ENST00000241393 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
CXCR4-201ENST00000241393 FBN2P35556 2912 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 IGHV1-58A0A0C4DH39 117 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 TRBV10-1A0A0K0K1A3 114 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 APOMO95445 188 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 IGHV3-30-3P0DP02 117 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 STHQ8IWL8 128 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
CXCR4-201ENST00000241393 POLQO75417 2590 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 ZFHX3Q15911 3703 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 A0A0J9YXY3 114 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 M0QXV9 152 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 CCL24O00175 119 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 SMAGPQ0VAQ4 97 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 C16orf95Q9H693 158 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 CENPEQ02224 2701 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 NACAE9PAV3 2078 aa5.6□□□□□ -1.51
CXCR4-201ENST00000241393 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 A4D1N5 150 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 CIDEAO60543 219 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 TIMM17BO60830 172 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 ETDBQ3ZM63 59 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 SBSPONQ8IVN8 264 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 C1orf158Q8N1D5 194 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 SPANXDQ9BXN6 97 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 SPANXCQ9NY87 97 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
CXCR4-201ENST00000241393 TSSC4Q9Y5U2 329 aaPredicted RBP5.59□□□□□ -1.51
CXCR4-201ENST00000241393 ABCA12Q86UK0 2595 aa5.59□□□□□ -1.51
CXCR4-201ENST00000241393 IGHV3-33P01772 117 aa5.59□□□□□ -1.52
CXCR4-201ENST00000241393 SCGB1A1P11684 91 aa5.59□□□□□ -1.52
CXCR4-201ENST00000241393 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.52
CXCR4-201ENST00000241393 TMEM263Q8WUH6 116 aaKnown RBP5.59□□□□□ -1.52
CXCR4-201ENST00000241393 ZANQ9Y493 2812 aa5.59□□□□□ -1.52
CXCR4-201ENST00000241393 CRYBG3Q68DQ2 2970 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 MYO9AB2RTY4 2548 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 MAP1AP78559 2803 aaPredicted RBP5.58□□□□□ -1.52
CXCR4-201ENST00000241393 TRAV4A0A0B4J268 109 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 AZU1P20160 251 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 PSMB2P49721 201 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 DAZ2Q13117 558 aaKnown RBP5.58□□□□□ -1.52
CXCR4-201ENST00000241393 ZFAND6Q6FIF0 208 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 Q6ZUT4 128 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 DAZ4Q86SG3 579 aaKnown RBP5.58□□□□□ -1.52
CXCR4-201ENST00000241393 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 LITAFQ99732 161 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 GEMIN7Q9H840 131 aaKnown RBP5.58□□□□□ -1.52
CXCR4-201ENST00000241393 DAZ3Q9NR90 486 aaKnown RBP5.58□□□□□ -1.52
CXCR4-201ENST00000241393 XCL2Q9UBD3 114 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 NDUFA12Q9UI09 145 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 ERG28Q9UKR5 140 aa5.58□□□□□ -1.52
CXCR4-201ENST00000241393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.57□□□□□ -1.52
CXCR4-201ENST00000241393 IGKV2-29A2NJV5 120 aaPredicted RBP5.57□□□□□ -1.52
CXCR4-201ENST00000241393 PRM2P04554 102 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 IFITM1P13164 125 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 SH2D6Q7Z4S9 175 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms