RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 SMAD5-AS1Q9Y6J3 95 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 UTRNP46939 3433 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 PLXNA4Q9HCM2 1894 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 PLXND1Q9Y4D7 1925 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 A0A087WVE0 104 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 DEFB113Q30KQ7 82 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 MYO18BQ8IUG5 2567 aa10.33□□□□□ -0.76
TARDBP-201ENST00000240185 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
TARDBP-201ENST00000240185 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
TARDBP-201ENST00000240185 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
TARDBP-201ENST00000240185 CSPG4Q6UVK1 2322 aa10.31□□□□□ -0.76
TARDBP-201ENST00000240185 SYCNQ0VAF6 134 aa10.31□□□□□ -0.76
TARDBP-201ENST00000240185 KLK5Q9Y337 293 aaPredicted RBP10.31□□□□□ -0.76
TARDBP-201ENST00000240185 K7EQG2 157 aa10.31□□□□□ -0.76
TARDBP-201ENST00000240185 CRYGDP07320 174 aa10.31□□□□□ -0.76
TARDBP-201ENST00000240185 PSPHP1O15172 72 aa10.3□□□□□ -0.76
TARDBP-201ENST00000240185 PROK1P58294 105 aa10.3□□□□□ -0.76
TARDBP-201ENST00000240185 DHRS4-AS1Q9P1J3 65 aa10.3□□□□□ -0.76
TARDBP-201ENST00000240185 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
TARDBP-201ENST00000240185 LINC00208Q96KT6 92 aa10.3□□□□□ -0.76
TARDBP-201ENST00000240185 J3QKU1 62 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 NRACQ8N912 160 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 A6NDX4 124 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 LY6LH3BQJ8 138 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
TARDBP-201ENST00000240185 M0R378 163 aa10.28□□□□□ -0.76
TARDBP-201ENST00000240185 ACACBO00763 2458 aa10.28□□□□□ -0.76
TARDBP-201ENST00000240185 TSHBP01222 138 aa10.28□□□□□ -0.76
TARDBP-201ENST00000240185 PRYO14603 147 aa10.27□□□□□ -0.76
TARDBP-201ENST00000240185 Q6ZPA2 131 aa10.27□□□□□ -0.77
TARDBP-201ENST00000240185 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.77
TARDBP-201ENST00000240185 MSMPQ1L6U9 139 aa10.27□□□□□ -0.77
TARDBP-201ENST00000240185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-201ENST00000240185 PTPN13Q12923 2485 aa10.27□□□□□ -0.77
TARDBP-201ENST00000240185 IGFL2Q6UWQ7 119 aa10.26□□□□□ -0.77
TARDBP-201ENST00000240185 MED12LQ86YW9 2145 aa10.26□□□□□ -0.77
TARDBP-201ENST00000240185 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
TARDBP-201ENST00000240185 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
TARDBP-201ENST00000240185 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-201ENST00000240185 OBSL1O75147 1896 aa10.26□□□□□ -0.77
TARDBP-201ENST00000240185 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
TARDBP-201ENST00000240185 IGLV2-11P01706 119 aa10.25□□□□□ -0.77
TARDBP-201ENST00000240185 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
TARDBP-201ENST00000240185 NRGNQ92686 78 aa10.25□□□□□ -0.77
TARDBP-201ENST00000240185 FRMPD3Q5JV73 1810 aa10.25□□□□□ -0.77
TARDBP-201ENST00000240185 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-201ENST00000240185 COL4A6Q14031 1691 aa10.24□□□□□ -0.77
TARDBP-201ENST00000240185 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
TARDBP-201ENST00000240185 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
TARDBP-201ENST00000240185 CRIP2P52943 208 aaPredicted RBP10.24□□□□□ -0.77
TARDBP-201ENST00000240185 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
TARDBP-201ENST00000240185 PRRC2AP48634 2157 aaKnown RBP10.24□□□□□ -0.77
TARDBP-201ENST00000240185 HIVEP2P31629 2446 aa10.24□□□□□ -0.77
TARDBP-201ENST00000240185 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
TARDBP-201ENST00000240185 C1orf229Q6ZS94 237 aaPredicted RBP10.23□□□□□ -0.77
TARDBP-201ENST00000240185 LINC00574Q9H8X3 128 aa10.23□□□□□ -0.77
TARDBP-201ENST00000240185 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
TARDBP-201ENST00000240185 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
TARDBP-201ENST00000240185 Q8N3U1 123 aa10.23□□□□□ -0.77
TARDBP-201ENST00000240185 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
TARDBP-201ENST00000240185 GAS8-AS1O95177 125 aa10.22□□□□□ -0.77
TARDBP-201ENST00000240185 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
TARDBP-201ENST00000240185 UBE2D1P51668 147 aa10.22□□□□□ -0.77
TARDBP-201ENST00000240185 ODF3BA8MYP8 253 aa10.22□□□□□ -0.77
TARDBP-201ENST00000240185 BEAN1Q3B7T3 259 aa10.22□□□□□ -0.77
TARDBP-201ENST00000240185 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.77
TARDBP-201ENST00000240185 BDP1A6H8Y1 2624 aa10.21□□□□□ -0.77
TARDBP-201ENST00000240185 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.78
TARDBP-201ENST00000240185 NCOA6Q14686 2063 aaPredicted RBP10.21□□□□□ -0.78
TARDBP-201ENST00000240185 UBE2D2P62837 147 aa10.21□□□□□ -0.78
TARDBP-201ENST00000240185 ANKHD1Q8IWZ3 2542 aaKnown RBP10.21□□□□□ -0.78
TARDBP-201ENST00000240185 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
TARDBP-201ENST00000240185 Q6ZVQ6 151 aa10.2□□□□□ -0.78
TARDBP-201ENST00000240185 EIF4EBP1Q13541 118 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-201ENST00000240185 LINC00310P59036 64 aa10.2□□□□□ -0.78
TARDBP-201ENST00000240185 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
TARDBP-201ENST00000240185 PRO0628Q9UI54 55 aa10.2□□□□□ -0.78
TARDBP-201ENST00000240185 ADORA2A-AS1P86434 159 aa10.19□□□□□ -0.78
TARDBP-201ENST00000240185 COX17Q14061 63 aa10.19□□□□□ -0.78
TARDBP-201ENST00000240185 BBC3Q96PG8 261 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-201ENST00000240185 TNFRSF13BO14836 293 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-201ENST00000240185 PLXNA2O75051 1894 aa10.19□□□□□ -0.78
TARDBP-201ENST00000240185 ZNF706Q9Y5V0 76 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-201ENST00000240185 FNDC1Q4ZHG4 1894 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-201ENST00000240185 TECTAO75443 2155 aa10.19□□□□□ -0.78
TARDBP-201ENST00000240185 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
TARDBP-201ENST00000240185 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
TARDBP-201ENST00000240185 UBE2D3P61077 147 aa10.18□□□□□ -0.78
TARDBP-201ENST00000240185 PIP4P1Q86T03 277 aa10.18□□□□□ -0.78
TARDBP-201ENST00000240185 Q8N814 137 aa10.17□□□□□ -0.78
TARDBP-201ENST00000240185 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-201ENST00000240185 ESRGQ1W209 222 aa10.17□□□□□ -0.78
TARDBP-201ENST00000240185 DAZAP2Q15038 168 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1304.2 ms