RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 WFDC10BQ8IUB3 73 aa9.89□□□□□ -0.83
NEK4-201ENST00000233027 BBC3Q96PG8 261 aaPredicted RBP9.89□□□□□ -0.83
NEK4-201ENST00000233027 C3orf84H3BNL1 204 aa9.88□□□□□ -0.83
NEK4-201ENST00000233027 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
NEK4-201ENST00000233027 PRORYQ9H606 182 aa9.88□□□□□ -0.83
NEK4-201ENST00000233027 KLK5Q9Y337 293 aaPredicted RBP9.88□□□□□ -0.83
NEK4-201ENST00000233027 Q6ZSV7 163 aa9.87□□□□□ -0.83
NEK4-201ENST00000233027 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
NEK4-201ENST00000233027 SNURFQ9Y675 71 aa9.87□□□□□ -0.83
NEK4-201ENST00000233027 DEFB131BA0A096LNP1 70 aa9.87□□□□□ -0.83
NEK4-201ENST00000233027 C1orf158Q8N1D5 194 aa9.87□□□□□ -0.83
NEK4-201ENST00000233027 TRBV6-5A0A0K0K1A5 114 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 CCDC179H3BU77 68 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 LINC00310P59036 64 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 TRBV6-4A0A1B0GX49 114 aa9.86□□□□□ -0.83
NEK4-201ENST00000233027 SRCAPQ6ZRS2 3230 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 A0A0J9YWU9 116 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 SMIM9A6NGZ8 99 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 FSTL3O95633 263 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 Q8N6K4 173 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 CREBBPQ92793 2442 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 A0A087WZ39 114 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
NEK4-201ENST00000233027 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 CCKP06307 115 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 EDN2P20800 178 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 ZNF702PQ9H963 129 aa9.85□□□□□ -0.83
NEK4-201ENST00000233027 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
NEK4-201ENST00000233027 XGP55808 180 aa9.84□□□□□ -0.83
NEK4-201ENST00000233027 ATP5EP2Q5VTU8 51 aa9.84□□□□□ -0.83
NEK4-201ENST00000233027 HCFC1P51610 2035 aa9.84□□□□□ -0.83
NEK4-201ENST00000233027 MUC22E2RYF6 1773 aaPredicted RBP9.84□□□□□ -0.83
NEK4-201ENST00000233027 SEC61GP60059 68 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 TNCP24821 2201 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 LST1O00453 97 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 UBE2D1P51668 147 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 LRRC75A-AS1Q8N1F1 130 aa9.83□□□□□ -0.84
NEK4-201ENST00000233027 TECTAO75443 2155 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 CEP192Q8TEP8 1941 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 KLLNB2CW77 178 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 C9orf85Q96MD7 179 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 TIMM17BO60830 172 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
NEK4-201ENST00000233027 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
NEK4-201ENST00000233027 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
NEK4-201ENST00000233027 Q6ZQY7 126 aa9.81□□□□□ -0.84
NEK4-201ENST00000233027 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
NEK4-201ENST00000233027 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
NEK4-201ENST00000233027 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
NEK4-201ENST00000233027 ZFHX2Q9C0A1 2572 aaPredicted RBP9.81□□□□□ -0.84
NEK4-201ENST00000233027 NDUFA7O95182 113 aa9.8□□□□□ -0.84
NEK4-201ENST00000233027 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
NEK4-201ENST00000233027 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
NEK4-201ENST00000233027 CLUHP3Q96NS8 147 aa9.79□□□□□ -0.84
NEK4-201ENST00000233027 PSMG3-AS1Q96PY0 264 aa9.79□□□□□ -0.84
NEK4-201ENST00000233027 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
NEK4-201ENST00000233027 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
NEK4-201ENST00000233027 MIFP14174 115 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 CRIP2P52943 208 aaPredicted RBP9.78□□□□□ -0.84
NEK4-201ENST00000233027 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 CASC2Q6XLA1 102 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 HILS1P60008 231 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 PRR4Q16378 134 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 WFDC13Q8IUB5 93 aa9.78□□□□□ -0.84
NEK4-201ENST00000233027 CDSNQ15517 529 aa9.77□□□□□ -0.85
NEK4-201ENST00000233027 IGIPA6NJ69 53 aa9.77□□□□□ -0.85
NEK4-201ENST00000233027 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
NEK4-201ENST00000233027 MRPS36P82909 103 aaKnown RBP9.76□□□□□ -0.85
NEK4-201ENST00000233027 FAM30AQ9NZY2 134 aa9.76□□□□□ -0.85
NEK4-201ENST00000233027 PRR14LQ5THK1 2151 aa9.75□□□□□ -0.85
NEK4-201ENST00000233027 FAM240AA0A1B0GVK7 77 aa9.75□□□□□ -0.85
NEK4-201ENST00000233027 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
NEK4-201ENST00000233027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
NEK4-201ENST00000233027 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 DSCAMO60469 2012 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 PLXNB1O43157 2135 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 M0R378 163 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 COX7CP15954 63 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 COX6A2Q02221 97 aa9.74□□□□□ -0.85
NEK4-201ENST00000233027 KPRPQ5T749 579 aaPredicted RBP9.74□□□□□ -0.85
NEK4-201ENST00000233027 IMUPQ9GZP8 106 aa9.73□□□□□ -0.85
NEK4-201ENST00000233027 LINC01006Q8NI28 216 aa9.73□□□□□ -0.85
NEK4-201ENST00000233027 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
NEK4-201ENST00000233027 UBE2D3P61077 147 aa9.72□□□□□ -0.85
NEK4-201ENST00000233027 UBE2D2P62837 147 aa9.72□□□□□ -0.85
NEK4-201ENST00000233027 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
NEK4-201ENST00000233027 LY6G6DO95868 133 aa9.72□□□□□ -0.85
NEK4-201ENST00000233027 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
NEK4-201ENST00000233027 LELP1Q5T871 98 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms