RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 MSMBP08118 114 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 TRBV27A0A0K0K1C4 114 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 M0QY20 66 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 PRM2P04554 102 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 PIEZO1Q92508 2521 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 H3BT86 120 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 AMELXQ99217 191 aa6.91□□□□□ -1.3
HLA-DOA-201ENST00000229829 ACACBO00763 2458 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 A0A087WVE0 104 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 PSMB8P28062 276 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 Q9HAA7 133 aa6.9□□□□□ -1.3
HLA-DOA-201ENST00000229829 FAM208BQ5VWN6 2430 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 TRAV25A0A0B4J276 109 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 K7EMT4 169 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 LEPROTO15243 131 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 TIMM17AQ99595 171 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.31
HLA-DOA-201ENST00000229829 A0A0J9YX75 114 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 MAPK1IP1LQ8NDC0 245 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 DAZ2Q13117 558 aaKnown RBP6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 DAZ4Q86SG3 579 aaKnown RBP6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 ZFYVE26Q68DK2 2539 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 TRBV30A0A0K0K1B3 111 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 PROK1P58294 105 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 DEFB112Q30KQ8 113 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
HLA-DOA-201ENST00000229829 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 DNAL4O96015 105 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 Q9UF83 564 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 TLN2Q9Y4G6 2542 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 SETD2Q9BYW2 2564 aaPredicted RBP6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 ZNF469Q96JG9 3925 aaPredicted RBP6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 COX7CP15954 63 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 K7EQG2 157 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 LINC00643Q86TS7 51 aa6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
HLA-DOA-201ENST00000229829 NF1P21359 2839 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 LRRC75A-AS1Q8N1F1 130 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 CHD6Q8TD26 2715 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 LRRK2Q5S007 2527 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 KNCNA6PVL3 124 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 LST1O00453 97 aa6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
HLA-DOA-201ENST00000229829 PTPN13Q12923 2485 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 TRBV7-7A0A0K0K1E9 115 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 C20orf203Q8NBC4 194 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
HLA-DOA-201ENST00000229829 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 B4DSR2 109 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 EPG5Q9HCE0 2579 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
HLA-DOA-201ENST00000229829 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
HLA-DOA-201ENST00000229829 ATOX1O00244 68 aa6.84□□□□□ -1.32
HLA-DOA-201ENST00000229829 PRB1P04280 392 aa6.84□□□□□ -1.32
HLA-DOA-201ENST00000229829 WFDC9Q8NEX5 89 aa6.84□□□□□ -1.32
HLA-DOA-201ENST00000229829 Q6ZSN1 163 aa6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 TMEM61Q8N0U2 210 aa6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 FAM240AA0A1B0GVK7 77 aa6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
HLA-DOA-201ENST00000229829 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 MALP21145 153 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 WFDC11Q8NEX6 87 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 SLURP1P55000 103 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 DEFB131AP59861 70 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 RBMY1BA6NDE4 496 aaKnown RBP6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 RBMY1EA6NEQ0 496 aaKnown RBP6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 ACYP1P07311 99 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 RBMY1DP0C7P1 496 aaKnown RBP6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 MIAQ16674 131 aa6.82□□□□□ -1.32
HLA-DOA-201ENST00000229829 DPH3Q96FX2 82 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 Q9H8V8 135 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms