RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 IGF1P05019 195 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 SMIM2Q9BVW6 85 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 FLNCQ14315 2725 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 M0R3E3 92 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 ZNF833PQ6ZTB9 187 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 C11orf45Q8TAV5 145 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 Q9H8V8 135 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 DSCAML1Q8TD84 2053 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
RFX4-201ENST00000229387 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
RFX4-201ENST00000229387 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 C6orf223Q8N319 242 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 CFAP46Q8IYW2 2715 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 DOPEY2Q9Y3R5 2298 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 A0A087WVE0 104 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
RFX4-201ENST00000229387 TMEM167AQ8TBQ9 72 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 TLN2Q9Y4G6 2542 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 IGHV1-3A0A0C4DH29 117 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 COX7A2LO14548 114 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 CIRBPQ14011 172 aaKnown RBP4.19□□□□□ -1.74
RFX4-201ENST00000229387 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
RFX4-201ENST00000229387 IGHV4-4A0A075B6R2 117 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 IGHV3-49A0A0A0MS15 119 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 IGHV3-66A0A0C4DH42 116 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 EGR2P11161 476 aaPredicted RBP4.18□□□□□ -1.74
RFX4-201ENST00000229387 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 PVRIGQ6DKI7 326 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 TMEM141Q96I45 108 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 C8orf49Q96NF6 230 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 LITAFQ99732 161 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 MSRB1Q9NZV6 116 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 BAALC-AS2P0C853 105 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 APOC4P55056 127 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 C2orf66Q6UXQ4 117 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 TMEM61Q8N0U2 210 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 LRRK2Q5S007 2527 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 USP9XQ93008 2570 aaPredicted RBP4.18□□□□□ -1.74
RFX4-201ENST00000229387 EPG5Q9HCE0 2579 aa4.18□□□□□ -1.74
RFX4-201ENST00000229387 BUB1B-PAK6H3BSN5 160 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 MRGPRG-AS1Q2M3A8 158 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 NOTCH3Q9UM47 2321 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 ABCA12Q86UK0 2595 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 C19orf84I3L1E1 186 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 ZFP36P26651 326 aaKnown RBP4.17□□□□□ -1.74
RFX4-201ENST00000229387 LY6G5BQ8NDX9 201 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 SETD2Q9BYW2 2564 aaPredicted RBP4.17□□□□□ -1.74
RFX4-201ENST00000229387 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 DNAL4O96015 105 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
RFX4-201ENST00000229387 ZNF876PQ49A33 203 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 Q8TAT8 98 aa4.17□□□□□ -1.74
RFX4-201ENST00000229387 IGKV2-40A0A087WW87 121 aaPredicted RBP4.16□□□□□ -1.74
RFX4-201ENST00000229387 IGKV2D-40P01614 121 aaPredicted RBP4.16□□□□□ -1.74
RFX4-201ENST00000229387 GNLYP22749 145 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 ZNF80P51504 273 aaPredicted RBP4.16□□□□□ -1.74
RFX4-201ENST00000229387 DAD1P61803 113 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 PDE6HQ13956 83 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 Q1T7F1 81 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 LINC00846Q9NV44 126 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 SONP18583 2426 aaKnown RBP4.16□□□□□ -1.74
RFX4-201ENST00000229387 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 F8WEM9 126 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 IGLV1-47P01700 117 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 PTPN13Q12923 2485 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 CCDC168Q8NDH2 2452 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 TSHBP01222 138 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 BLCAPP62952 87 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 NDPQ00604 133 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 MIAQ16674 131 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 ECSCRQ19T08 205 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 VMO1Q7Z5L0 202 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 MAPK1IP1LQ8NDC0 245 aa4.16□□□□□ -1.74
RFX4-201ENST00000229387 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 M0R1W7 72 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 M0R381 172 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 ESRGQ1W209 222 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 BRD3OSQ6XYD6 125 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.15□□□□□ -1.74
RFX4-201ENST00000229387 BPESC1Q9GZL8 116 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 LINC00574Q9H8X3 128 aa4.15□□□□□ -1.74
RFX4-201ENST00000229387 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
RFX4-201ENST00000229387 NDUFS5O43920 106 aa4.15□□□□□ -1.75
RFX4-201ENST00000229387 PPP1R17O96001 155 aa4.15□□□□□ -1.75
RFX4-201ENST00000229387 PRB1P04280 392 aa4.15□□□□□ -1.75
RFX4-201ENST00000229387 KLK15Q9H2R5 256 aa4.15□□□□□ -1.75
RFX4-201ENST00000229387 TRBV12-3P01733 135 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 FAM229BQ4G0N7 80 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 UNQ9165/PRO28630Q6UXU0 137 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 G3V318 75 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 TMEM30BQ3MIR4 351 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 DPM3Q9P2X0 92 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms