RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 TMEM243Q9BU79 118 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 CSDC2Q9Y534 153 aaKnown RBP10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
LAPTM4A-201ENST00000175091 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
LAPTM4A-201ENST00000175091 E9PLD3 99 aa10.92□□□□□ -0.66
LAPTM4A-201ENST00000175091 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
LAPTM4A-201ENST00000175091 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
LAPTM4A-201ENST00000175091 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
LAPTM4A-201ENST00000175091 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
LAPTM4A-201ENST00000175091 VSIG2Q96IQ7 327 aa10.91□□□□□ -0.66
LAPTM4A-201ENST00000175091 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
LAPTM4A-201ENST00000175091 H7C423 109 aa10.9□□□□□ -0.66
LAPTM4A-201ENST00000175091 PAX4O43316 350 aa10.9□□□□□ -0.66
LAPTM4A-201ENST00000175091 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
LAPTM4A-201ENST00000175091 A0A0J9YXV3 536 aa10.9□□□□□ -0.67
LAPTM4A-201ENST00000175091 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.67
LAPTM4A-201ENST00000175091 DGAT2L7PQ6IED9 249 aa10.9□□□□□ -0.67
LAPTM4A-201ENST00000175091 ATP6V0E2Q8NHE4 81 aa10.9□□□□□ -0.67
LAPTM4A-201ENST00000175091 C2orf88Q9BSF0 95 aa10.9□□□□□ -0.67
LAPTM4A-201ENST00000175091 UBE2L6O14933 153 aa10.89□□□□□ -0.67
LAPTM4A-201ENST00000175091 SIVA1O15304 175 aa10.89□□□□□ -0.67
LAPTM4A-201ENST00000175091 HERVK_113P61574 105 aa10.89□□□□□ -0.67
LAPTM4A-201ENST00000175091 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
LAPTM4A-201ENST00000175091 UBE2D1P51668 147 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 A0A0J9YY99 117 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 K7EIL1 84 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 PRB2P02812 416 aaPredicted RBP10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 C12orf74Q32Q52 190 aa10.88□□□□□ -0.67
LAPTM4A-201ENST00000175091 TINCRA0A1B0GVN0 87 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 F5H768 121 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 AMMECR1LQ6DCA0 310 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
LAPTM4A-201ENST00000175091 HINT1P49773 126 aaPredicted RBP10.86□□□□□ -0.67
LAPTM4A-201ENST00000175091 BATFQ16520 125 aa10.86□□□□□ -0.67
LAPTM4A-201ENST00000175091 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
LAPTM4A-201ENST00000175091 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
LAPTM4A-201ENST00000175091 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 HUWE1Q7Z6Z7 4374 aaKnown RBP10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 HTN3P15516 51 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 GAGE6Q13070 117 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 CHCHD5Q9BSY4 110 aa10.85□□□□□ -0.67
LAPTM4A-201ENST00000175091 A0A096LPF7 62 aa10.84□□□□□ -0.67
LAPTM4A-201ENST00000175091 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 TSPEAR-AS2P59090 65 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
LAPTM4A-201ENST00000175091 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 TIRAPP58753 221 aa10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 HSD52Q0P140 79 aa10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 Q6ZTC4 211 aa10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
LAPTM4A-201ENST00000175091 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
LAPTM4A-201ENST00000175091 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
LAPTM4A-201ENST00000175091 LEPROTO15243 131 aa10.81□□□□□ -0.68
LAPTM4A-201ENST00000175091 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
LAPTM4A-201ENST00000175091 GEMIN7Q9H840 131 aaKnown RBP10.81□□□□□ -0.68
LAPTM4A-201ENST00000175091 J3QQQ9 107 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 HERVK_113P63121 156 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 COL5A1-AS1Q5SY13 56 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 LINC00469Q8N7U9 141 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 SEC11AP67812 179 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 SH2D6Q7Z4S9 175 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 CDKN2A-AS1Q9UH64 79 aa10.8□□□□□ -0.68
LAPTM4A-201ENST00000175091 H3BNG1 76 aa10.79□□□□□ -0.68
LAPTM4A-201ENST00000175091 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 IGHV1-58A0A0C4DH39 117 aa10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 COX6A2Q02221 97 aa10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
LAPTM4A-201ENST00000175091 TRAV8-3A0A0A6YYJ7 113 aa10.77□□□□□ -0.68
LAPTM4A-201ENST00000175091 IGHV3-30-3P0DP02 117 aa10.77□□□□□ -0.68
LAPTM4A-201ENST00000175091 H3BRM9 83 aa10.77□□□□□ -0.69
LAPTM4A-201ENST00000175091 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
LAPTM4A-201ENST00000175091 RBX1P62877 108 aa10.77□□□□□ -0.69
LAPTM4A-201ENST00000175091 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
LAPTM4A-201ENST00000175091 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
LAPTM4A-201ENST00000175091 A0A1B0GV90 55 aa10.76□□□□□ -0.69
LAPTM4A-201ENST00000175091 NANOS2P60321 138 aaKnown RBP10.76□□□□□ -0.69
LAPTM4A-201ENST00000175091 DNAH9Q9NYC9 4486 aa10.76□□□□□ -0.69
LAPTM4A-201ENST00000175091 LELP1Q5T871 98 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 SCGB1D4Q6XE38 83 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 TAL2Q16559 108 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 ORAOV1Q8WV07 137 aa10.75□□□□□ -0.69
LAPTM4A-201ENST00000175091 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
LAPTM4A-201ENST00000175091 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
LAPTM4A-201ENST00000175091 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms