RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 LOC100131303A0A0U1RQF7 123 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 A0A0U1RQV1 116 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 C6orf223Q8N319 242 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 GRNP28799 593 aaKnown RBP2.59□□□□□ -1.99
NEB-201ENST00000172853 COX17Q14061 63 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 SERTAD4-AS1Q5TG53 156 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 FXYD5Q96DB9 178 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 CD164L2Q6UWJ8 174 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 TOMM6Q96B49 74 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 MBD6Q96DN6 1003 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 IGLV11-55A0A075B6I3 123 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 SPRY4Q9C004 299 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 NDUFA7O95182 113 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 CHCHD7Q9BUK0 85 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 TRBV6-8A0A0A6YYG3 113 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 PIK3CD-AS1Q5SR53 167 aa2.59□□□□□ -1.99
NEB-201ENST00000172853 WFDC2Q14508 124 aa2.59□□□□□ -2
NEB-201ENST00000172853 IGFL2Q6UWQ7 119 aa2.59□□□□□ -2
NEB-201ENST00000172853 Q6ZQY7 126 aa2.59□□□□□ -2
NEB-201ENST00000172853 THSD7BQ9C0I4 1608 aa2.59□□□□□ -2
NEB-201ENST00000172853 LTBP2Q14767 1821 aa2.59□□□□□ -2
NEB-201ENST00000172853 MDFICQ9P1T7 246 aa2.59□□□□□ -2
NEB-201ENST00000172853 IGLC6P0CF74 106 aa2.59□□□□□ -2
NEB-201ENST00000172853 Q6ZR03 302 aa2.59□□□□□ -2
NEB-201ENST00000172853 PYGO1Q9Y3Y4 419 aa2.59□□□□□ -2
NEB-201ENST00000172853 PCDH15Q96QU1 1955 aa2.59□□□□□ -2
NEB-201ENST00000172853 TRBV27A0A0K0K1C4 114 aa2.59□□□□□ -2
NEB-201ENST00000172853 SCXQ7RTU7 201 aa2.58□□□□□ -2
NEB-201ENST00000172853 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
NEB-201ENST00000172853 SBSPONQ8IVN8 264 aa2.58□□□□□ -2
NEB-201ENST00000172853 FBXL19-AS1Q494R0 122 aa2.58□□□□□ -2
NEB-201ENST00000172853 Q6ZRM9 215 aa2.58□□□□□ -2
NEB-201ENST00000172853 TNRC6BQ9UPQ9 1833 aaKnown RBP2.58□□□□□ -2
NEB-201ENST00000172853 COL4A5P29400 1685 aa2.58□□□□□ -2
NEB-201ENST00000172853 PRAC2D3DTV9 90 aa2.58□□□□□ -2
NEB-201ENST00000172853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.58□□□□□ -2
NEB-201ENST00000172853 LINC00643Q86TS7 51 aa2.58□□□□□ -2
NEB-201ENST00000172853 MED13LQ71F56 2210 aa2.58□□□□□ -2
NEB-201ENST00000172853 Q6ZSV7 163 aa2.58□□□□□ -2
NEB-201ENST00000172853 ZNF747Q9BV97 191 aa2.58□□□□□ -2
NEB-201ENST00000172853 WT1-ASQ06250 92 aa2.58□□□□□ -2
NEB-201ENST00000172853 Q6ZTI0 123 aa2.58□□□□□ -2
NEB-201ENST00000172853 CLEC2BQ92478 149 aa2.58□□□□□ -2
NEB-201ENST00000172853 BBC3Q96PG8 261 aaPredicted RBP2.58□□□□□ -2
NEB-201ENST00000172853 DAND5Q8N907 189 aa2.58□□□□□ -2
NEB-201ENST00000172853 PLCE1Q9P212 2302 aa2.58□□□□□ -2
NEB-201ENST00000172853 PLXNB3Q9ULL4 1909 aa2.58□□□□□ -2
NEB-201ENST00000172853 SHANK1Q9Y566 2161 aa2.57□□□□□ -2
NEB-201ENST00000172853 OXLD1Q5BKU9 147 aa2.57□□□□□ -2
NEB-201ENST00000172853 PLXNA2O75051 1894 aa2.57□□□□□ -2
NEB-201ENST00000172853 FLVCR1-AS1Q8TAF5 88 aa2.57□□□□□ -2
NEB-201ENST00000172853 WWC2-AS2Q96NR7 200 aa2.57□□□□□ -2
NEB-201ENST00000172853 ZNF106Q9H2Y7 1883 aaKnown RBP2.57□□□□□ -2
NEB-201ENST00000172853 GPR179Q6PRD1 2367 aa2.57□□□□□ -2
NEB-201ENST00000172853 LINC00205P59089 165 aa2.57□□□□□ -2
NEB-201ENST00000172853 C6orf99Q4VX62 202 aa2.57□□□□□ -2
NEB-201ENST00000172853 I3L2K1 104 aa2.57□□□□□ -2
NEB-201ENST00000172853 PSMG3-AS1Q96PY0 264 aa2.57□□□□□ -2
NEB-201ENST00000172853 FAM30AQ9NZY2 134 aa2.57□□□□□ -2
NEB-201ENST00000172853 RBM12B-AS1Q9P1G2 102 aa2.57□□□□□ -2
NEB-201ENST00000172853 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
NEB-201ENST00000172853 RITA1Q96K30 269 aa2.57□□□□□ -2
NEB-201ENST00000172853 TET2Q6N021 2002 aaPredicted RBP2.57□□□□□ -2
NEB-201ENST00000172853 LINC00575Q6W349 94 aa2.57□□□□□ -2
NEB-201ENST00000172853 MRPS36P82909 103 aaKnown RBP2.57□□□□□ -2
NEB-201ENST00000172853 TRBV30A0A0K0K1B3 111 aa2.57□□□□□ -2
NEB-201ENST00000172853 CELA1Q9UNI1 258 aa2.57□□□□□ -2
NEB-201ENST00000172853 ZNF726P1Q15940 193 aa2.57□□□□□ -2
NEB-201ENST00000172853 C15orf65H3BRN8 121 aa2.57□□□□□ -2
NEB-201ENST00000172853 TANC2Q9HCD6 1990 aa2.56□□□□□ -2
NEB-201ENST00000172853 C20orf203Q8NBC4 194 aa2.56□□□□□ -2
NEB-201ENST00000172853 ENHOQ6UWT2 76 aa2.56□□□□□ -2
NEB-201ENST00000172853 TMEM254Q8TBM7 123 aa2.56□□□□□ -2
NEB-201ENST00000172853 C10orf91Q5T1B1 145 aa2.56□□□□□ -2
NEB-201ENST00000172853 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
NEB-201ENST00000172853 RNASE3P12724 160 aaKnown RBP2.56□□□□□ -2
NEB-201ENST00000172853 MSMPQ1L6U9 139 aa2.56□□□□□ -2
NEB-201ENST00000172853 CDIP1Q9H305 208 aa2.56□□□□□ -2
NEB-201ENST00000172853 CRYGAP11844 174 aa2.56□□□□□ -2
NEB-201ENST00000172853 LINC00173Q6ZV60 143 aa2.56□□□□□ -2
NEB-201ENST00000172853 PATE2Q6UY27 113 aa2.56□□□□□ -2
NEB-201ENST00000172853 IGKV2D-30A0A075B6S6 120 aa2.56□□□□□ -2
NEB-201ENST00000172853 IGKV2-30P06310 120 aa2.56□□□□□ -2
NEB-201ENST00000172853 Q8N2B8 174 aa2.56□□□□□ -2
NEB-201ENST00000172853 CCDC179H3BU77 68 aa2.56□□□□□ -2
NEB-201ENST00000172853 E9PLD3 99 aa2.56□□□□□ -2
NEB-201ENST00000172853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.56□□□□□ -2
NEB-201ENST00000172853 K7EIM0 57 aa2.56□□□□□ -2
NEB-201ENST00000172853 A0A1B0GU69 56 aa2.56□□□□□ -2
NEB-201ENST00000172853 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
NEB-201ENST00000172853 C20orf173Q96LM9 149 aa2.56□□□□□ -2
NEB-201ENST00000172853 NDUFV3P56181 108 aaKnown RBP2.56□□□□□ -2
NEB-201ENST00000172853 RPL39P62891 51 aaKnown RBP2.56□□□□□ -2
NEB-201ENST00000172853 Q9BRP9 147 aa2.56□□□□□ -2
NEB-201ENST00000172853 TIMM17BO60830 172 aa2.56□□□□□ -2
NEB-201ENST00000172853 C11orf71Q6IPW1 123 aa2.56□□□□□ -2
NEB-201ENST00000172853 PTH2Q96A98 100 aa2.56□□□□□ -2
NEB-201ENST00000172853 C11orf53Q8IXP5 236 aa2.55□□□□□ -2
NEB-201ENST00000172853 SPACA4Q8TDM5 124 aa2.55□□□□□ -2
NEB-201ENST00000172853 WDR87Q6ZQQ6 2873 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms