RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 A0A0B4J2C4 111 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 SLURP1P55000 103 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 PRORYQ9H606 182 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
CTDP1-201ENST00000075430 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 RHOHQ15669 191 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 PIK3CD-AS1Q5SR53 167 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 SBSPONQ8IVN8 264 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 PRIMA1Q86XR5 153 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
CTDP1-201ENST00000075430 COX6A2Q02221 97 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 A6NDX4 124 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 Q8N2B8 174 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
CTDP1-201ENST00000075430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
CTDP1-201ENST00000075430 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
CTDP1-201ENST00000075430 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
CTDP1-201ENST00000075430 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
CTDP1-201ENST00000075430 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
CTDP1-201ENST00000075430 MIAQ16674 131 aa12.21□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.46
CTDP1-201ENST00000075430 RNASE1P07998 156 aaKnown RBP12.2□□□□□ -0.46
CTDP1-201ENST00000075430 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
CTDP1-201ENST00000075430 LITAFQ99732 161 aa12.2□□□□□ -0.46
CTDP1-201ENST00000075430 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-201ENST00000075430 K7EQG2 157 aa12.19□□□□□ -0.46
CTDP1-201ENST00000075430 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
CTDP1-201ENST00000075430 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 ATP5G1P05496 136 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 BAALC-AS2P0C853 105 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 PFN2P35080 140 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 LST1O00453 97 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 SVIPQ8NHG7 77 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 LINC01356Q8N9X3 169 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 FAM104AQ969W3 186 aa12.15□□□□□ -0.47
CTDP1-201ENST00000075430 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.47
CTDP1-201ENST00000075430 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
CTDP1-201ENST00000075430 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
CTDP1-201ENST00000075430 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
CTDP1-201ENST00000075430 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 PSMB8P28062 276 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 LINC00158P58513 81 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 SLPIP03973 132 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 H3BT86 120 aa12.11□□□□□ -0.47
CTDP1-201ENST00000075430 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
CTDP1-201ENST00000075430 K7EMT4 169 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 UBE2L6O14933 153 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 C14orf132Q9NPU4 83 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 APCP25054 2843 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 DNAL4O96015 105 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 Q6ZTI0 123 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 Q96MF0 132 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 LINC00242Q5T6M2 205 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 SETXQ7Z333 2677 aaKnown RBP12.08□□□□□ -0.48
CTDP1-201ENST00000075430 H3BUA1 57 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
CTDP1-201ENST00000075430 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
CTDP1-201ENST00000075430 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms