RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Ighv6-3A0A075B5T2 118 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr364-ps1A0A140T8Q2 307 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm12830F6XVH0 157 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Spint5J3KMK8 105 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ormdl3Q9CPZ6 153 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Sec11aQ9R0P6 179 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Mixl1Q9WUI0 231 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Exph5Q0VAV2 1960 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Hist2h2beQ64524 126 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Sptbn2Q68FG2 2388 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr1185-ps1F6XP16 303 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 LtaP09225 202 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Fam168aQ8BGZ2 244 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Mrpl33Q9CQP0 65 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Atxn7l1Q9CZ05 146 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 2200002J24RikQ9D807 110 aa11.48□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Rps2-ps6A0A140T8L5 221 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Igkv6-15A0A140T8M5 115 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm45623A0A1B0GSF6 103 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Gm3045A0A1D5RMA1 209 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Foxf2O54743 446 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Zfp420Q7TMN8 578 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tmem177Q8BPE4 311 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Scnm1Q8K136 229 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 GaptQ8CB93 157 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 GrhprQ91Z53 328 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Tmem29A2ANF5 204 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 P06334 169 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Zfp72Q0VFY0 435 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Scrt1Q99M85 348 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Dynlrb2Q9DAJ5 96 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 V1rd19Q3KNP5 305 aa11.47□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Igkv13-84A0A140T8N3 115 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Znf431E9QAG8 526 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Polr3kQ9CQZ7 108 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Prr23a3Q9CWP9 254 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Col5a3Q9JLI2 1739 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Olfr1189A2AV11 306 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Zfp27P10077 819 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Timp3P39876 211 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Trav15-1-dv6-1Q5R1D2 117 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 MNCb-2875Q9DCB3 74 aa11.46□□□□□ -0.57
Pcdha1-202ENSMUST00000193839 Ins1P01325 108 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Fam3dP97805 223 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr1419Q7TQS2 343 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 GrnP28798 589 aaKnown RBP11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 MymxQ2Q5T5 84 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Znf664Q4VA44 261 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 NotoQ5TIS6 240 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Znhit3Q9CQK1 151 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 AmtnQ9D3J8 213 aa11.46□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Zfp648D3Z0W3 525 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 BC030500E9Q6W0 185 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Adrb3P25962 400 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 MavsQ8VCF0 503 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr1441Q8VFV3 318 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Zcchc24B2RVL6 241 aaKnown RBP11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm4791J3QQ14 102 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 S100a4P07091 101 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Jpt2Q6PGH2 190 aaKnown RBP11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr984Q8VFN1 314 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Prok2Q9QXU7 128 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Sec16aA2AIX1 2377 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm5157A0A087WRH8 301 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Tmem8bB1AWJ5 472 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Defa3P28310 93 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Defa10P50708 93 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Defa15P50713 93 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr1178Q7TR20 323 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Tmem189Q99LQ7 271 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ms4a8Q99N10 290 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Neurog3P70661 214 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Rab37Q9JKM7 223 aa11.45□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Srrm4Q8BKA3 608 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Vmn1r235Q8R297 328 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr1258Q8VGN6 311 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Rnf125Q9D9R0 233 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 SlaQ60898 281 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Slamf7Q8BHK6 333 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Pxt1Q8K459 51 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr1012Q8VFJ7 311 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Spcs1Q9D958 161 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm21719J3KMI9 230 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 P01725 110 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr981Q8VEU2 310 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Lypd8Q9D7S0 255 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Mettl26Q9DCS2 204 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Pcnx1Q9QYC1 2344 aa11.44□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm17334Q8C6U3 126 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Phf3B2RQG2 2025 aaKnown RBP11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 CampP51437 172 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Vsig8Q6P3A4 417 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Q8VC23 124 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Erg28Q9ERY9 140 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Cend1Q9JKC6 149 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Slc25a20Q9Z2Z6 301 aaKnown RBP11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ighv8-9A0A0G2JET1 119 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Pilrb2Q2YFS1 225 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Frem1Q684R7 2191 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 TectaO08523 2155 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 111 ms