RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Bex6Q3TZW7 114 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Pafah1b2Q61206 229 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Ercc8Q8CFD5 397 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Slc17a9Q8VCL5 447 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Foxj2Q9ES18 565 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 P01792 123 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 RanP62827 216 aaKnown RBP12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Gm10842Q3U587 122 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Olfr495Q8VF12 330 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Mapk1ip1Q9D7G9 263 aa12.1□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Trank1Q8BV79 2999 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 CrebbpP45481 2441 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Trav4-4-dv10A0A075B651 110 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Nxph4G3X9N5 304 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Gm21900J3QP38 180 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 KhkP97328 298 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Arl14eplQ3UKZ7 152 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Gm10192Q3V0S1 108 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Znf329Q6GQR8 522 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Snrnp40Q6PE01 358 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Neil2Q6R2P8 329 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Dopey1Q8BL99 2399 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Zfp292Q9Z2U2 2698 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Gm28778A0A087WSK7 233 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Rpl19P84099 196 aaKnown RBP12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Olfr127Q8VF25 323 aa12.09□□□□□ -0.47
Nkx3-1-201ENSMUST00000022646 Gm37388A0A0A6YY46 143 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 PpoxP51175 477 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 CebpdQ00322 268 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Trav15-1-dv6-1Q5R1D2 117 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr411Q7TRW8 315 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gng5Q80SZ7 68 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 5930422O12RikQ8C4Y4 123 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Vmn1r61W4VSP5 300 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Ascl5M0QWB7 188 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Phxr2P15972 65 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Duxbl2Q7TNE6 350 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 V1ra8Q9EQ48 279 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Pf4Q9Z126 105 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Tln1P26039 2541 aaKnown RBP12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Vma21-psA0A140T8R2 101 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 1700003H04RikE9PXM2 192 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr748E9Q9Z0 307 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Ca2P00920 260 aaKnown RBP12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Fgf5P15656 264 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Tmem30bQ8BHG3 353 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Fam162bQ9CX19 157 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Zdhhc16Q9ESG8 361 aa12.08□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 B1ARW8 110 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Dnajc30P59041 219 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Znf48Q3US17 591 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 1500009C09RikD3YYW9 81 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Arl6ip6Q8BH07 226 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 OtosQ8R448 89 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr816Q8VFU2 312 aa12.07□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gm10130F6ZHM5 101 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Fabp4P04117 132 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Znf260Q62513 407 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gm5868Q8BJG1 145 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 ChodlQ9CXM0 273 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Hdgfl3Q9JMG7 202 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 CompQ9R0G6 755 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Egr1P08046 533 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Vmn1r195Q5SVD6 316 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr148Q60887 310 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Ppp1r3cQ7TMB3 317 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Iba57Q8CAK1 358 aaKnown RBP12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gatad1Q920S3 266 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 DysfQ9ESD7 2090 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Tmem116A0A0G2JGD3 401 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Zfp930A0A1D5RM15 441 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gm27021M0QWE2 156 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 MgpP19788 104 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Uqcc3Q8K2T4 89 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Rbms1Q91W59 403 aaKnown RBP12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Ceacam11Q9D0Z8 303 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Dram1Q9DC58 238 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gab2Q9Z1S8 665 aa12.06□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 F5O88783 2183 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Zfp825A0A1Y7VK00 292 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 LfngO09010 378 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Tnfsf15Q5UBV8 252 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Tas2r114Q7M722 309 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr1434Q7TQR9 312 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gm9949Q8C9F4 104 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Nhp2Q9CRB2 153 aaKnown RBP12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Psmg3Q9CZH3 122 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr961Q9EQ84 314 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Timm10bQ9WV96 100 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Trav7n-4A0A075B620 113 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Fbxl7Q5BJ29 491 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Slc17a2Q5SZA1 478 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr996Q7TRA0 314 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Olfr1242Q8VGM6 306 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 EpcamQ99JW5 315 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Nus1Q99LJ8 297 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Lypd8Q9D7S0 255 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Rnase4Q9JJH1 148 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Mixl1Q9WUI0 231 aa12.05□□□□□ -0.48
Nkx3-1-201ENSMUST00000022646 Gm9602J3QPD5 205 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms