RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C ELF1P36053 145 aa3.65□□□□□ -1.83
ATG3YNR007C YKR075CP36155 307 aa3.65□□□□□ -1.83
ATG3YNR007C HLJ1P48353 224 aa3.65□□□□□ -1.83
ATG3YNR007C YGL117WP53133 265 aa3.65□□□□□ -1.83
ATG3YNR007C ARG7Q04728 441 aa3.65□□□□□ -1.83
ATG3YNR007C PRP22P24384 1145 aaKnown RBP3.64□□□□□ -1.83
ATG3YNR007C HOT13P36078 116 aa3.64□□□□□ -1.83
ATG3YNR007C UBP12P39538 1254 aa3.64□□□□□ -1.83
ATG3YNR007C MGS1P40151 587 aa3.64□□□□□ -1.83
ATG3YNR007C SDA1P53313 767 aaKnown RBP3.64□□□□□ -1.83
ATG3YNR007C CPR8P53728 308 aa3.64□□□□□ -1.83
ATG3YNR007C YMR210WQ03649 449 aa3.64□□□□□ -1.83
ATG3YNR007C AI5_ALPHAQ9ZZX1 630 aa3.64□□□□□ -1.83
ATG3YNR007C MLP1Q02455 1875 aaKnown RBP3.64□□□□□ -1.83
ATG3YNR007C YLR278CQ05854 1341 aa3.64□□□□□ -1.83
ATG3YNR007C SNF2P22082 1703 aa3.64□□□□□ -1.83
ATG3YNR007C YLL066CQ99208 1374 aa3.63□□□□□ -1.83
ATG3YNR007C FKS3Q04952 1785 aa3.63□□□□□ -1.83
ATG3YNR007C STE4P18851 423 aa3.63□□□□□ -1.83
ATG3YNR007C AAD3P25612 363 aa3.63□□□□□ -1.83
ATG3YNR007C ULP2P40537 1034 aaPredicted RBP3.63□□□□□ -1.83
ATG3YNR007C THI6P41835 540 aa3.63□□□□□ -1.83
ATG3YNR007C MPS1P54199 764 aa3.63□□□□□ -1.83
ATG3YNR007C DIB1Q06819 143 aaPredicted RBP3.63□□□□□ -1.83
ATG3YNR007C GUD1Q07729 489 aa3.63□□□□□ -1.83
ATG3YNR007C APC1P53886 1748 aa3.63□□□□□ -1.83
ATG3YNR007C RPO41P13433 1351 aaKnown RBP3.63□□□□□ -1.83
ATG3YNR007C YRF1-3P0CX14 1859 aa3.62□□□□□ -1.83
ATG3YNR007C YRF1-7P0CX15 1859 aa3.62□□□□□ -1.83
ATG3YNR007C YRF1-6P53819 1859 aa3.62□□□□□ -1.83
ATG3YNR007C TSR4P25040 408 aa3.62□□□□□ -1.83
ATG3YNR007C YKU70P32807 602 aa3.62□□□□□ -1.83
ATG3YNR007C ATG36P46983 293 aa3.62□□□□□ -1.83
ATG3YNR007C BFA1P47113 574 aa3.62□□□□□ -1.83
ATG3YNR007C RCR2Q03446 210 aaKnown RBP3.62□□□□□ -1.83
ATG3YNR007C YLR407WQ06070 228 aa3.62□□□□□ -1.83
ATG3YNR007C THI73Q07904 523 aa3.62□□□□□ -1.83
ATG3YNR007C MHP1P43638 1398 aa3.62□□□□□ -1.83
ATG3YNR007C SSB1P11484 613 aaKnown RBP3.61□□□□□ -1.83
ATG3YNR007C OSM1P21375 501 aaKnown RBP3.61□□□□□ -1.83
ATG3YNR007C SSB2P40150 613 aaKnown RBP3.61□□□□□ -1.83
ATG3YNR007C PXA1P41909 870 aa3.61□□□□□ -1.83
ATG3YNR007C YGR237CP50089 785 aa3.61□□□□□ -1.83
ATG3YNR007C PIP2P52960 996 aa3.61□□□□□ -1.83
ATG3YNR007C SCS3P53012 380 aa3.61□□□□□ -1.83
ATG3YNR007C MET13P53128 600 aa3.61□□□□□ -1.83
ATG3YNR007C ADE16P54113 591 aaKnown RBP3.61□□□□□ -1.83
ATG3YNR007C UME1Q03010 460 aa3.61□□□□□ -1.83
ATG3YNR007C RMT2Q03305 412 aa3.61□□□□□ -1.83
ATG3YNR007C ORM2Q06144 216 aa3.61□□□□□ -1.83
ATG3YNR007C IRC3Q06683 689 aa3.61□□□□□ -1.83
ATG3YNR007C NUP145P49687 1317 aa3.61□□□□□ -1.83
ATG3YNR007C YML133CQ03099 1374 aa3.61□□□□□ -1.83
ATG3YNR007C YLL067CQ07888 1374 aa3.61□□□□□ -1.83
ATG3YNR007C IME1P21190 360 aa3.6□□□□□ -1.83
ATG3YNR007C YUR1P26725 428 aa3.6□□□□□ -1.83
ATG3YNR007C HSP104P31539 908 aaKnown RBP3.6□□□□□ -1.83
ATG3YNR007C RIM4P38741 713 aa3.6□□□□□ -1.83
ATG3YNR007C PIH1P38768 344 aa3.6□□□□□ -1.83
ATG3YNR007C PSA1P41940 361 aaKnown RBP3.6□□□□□ -1.83
ATG3YNR007C PAP2P53632 584 aaKnown RBP3.6□□□□□ -1.83
ATG3YNR007C STP1Q00947 519 aa3.6□□□□□ -1.83
ATG3YNR007C TRS23Q03784 219 aa3.6□□□□□ -1.83
ATG3YNR007C PPN1Q04119 674 aa3.6□□□□□ -1.83
ATG3YNR007C PDS5Q04264 1277 aa3.6□□□□□ -1.83
ATG3YNR007C ZPS1Q12512 249 aa3.6□□□□□ -1.83
ATG3YNR007C IRA1P18963 3092 aa3.59□□□□□ -1.83
ATG3YNR007C PMA2P19657 947 aa3.59□□□□□ -1.83
ATG3YNR007C MRC1P25588 1096 aa3.59□□□□□ -1.83
ATG3YNR007C PFF1P38244 976 aa3.59□□□□□ -1.83
ATG3YNR007C CKB2P38930 258 aa3.59□□□□□ -1.83
ATG3YNR007C YEN1P40028 759 aa3.59□□□□□ -1.83
ATG3YNR007C BUD8P41698 603 aa3.59□□□□□ -1.83
ATG3YNR007C DSD1P53095 428 aa3.59□□□□□ -1.83
ATG3YNR007C SPO1P53541 631 aa3.59□□□□□ -1.83
ATG3YNR007C IOC4Q04213 475 aa3.59□□□□□ -1.83
ATG3YNR007C YPS7Q06325 596 aa3.59□□□□□ -1.83
ATG3YNR007C SSP2Q08646 371 aa3.59□□□□□ -1.83
ATG3YNR007C LPD1P09624 499 aaKnown RBP3.58□□□□□ -1.84
ATG3YNR007C PPE1P38796 400 aa3.58□□□□□ -1.84
ATG3YNR007C TMN3P40071 706 aa3.58□□□□□ -1.84
ATG3YNR007C EAF6P47128 113 aa3.58□□□□□ -1.84
ATG3YNR007C BPL1P48445 690 aaPredicted RBP3.58□□□□□ -1.84
ATG3YNR007C FDC1Q03034 503 aa3.58□□□□□ -1.84
ATG3YNR007C CEF1Q03654 590 aaPredicted RBP3.58□□□□□ -1.84
ATG3YNR007C CIR2Q08822 631 aa3.58□□□□□ -1.84
ATG3YNR007C FAP7Q12055 197 aaPredicted RBP3.58□□□□□ -1.84
ATG3YNR007C NYV1Q12255 253 aa3.58□□□□□ -1.84
ATG3YNR007C FAB1P34756 2278 aa3.58□□□□□ -1.84
ATG3YNR007C RPL7AP05737 244 aaKnown RBP3.57□□□□□ -1.84
ATG3YNR007C SWI6P09959 803 aa3.57□□□□□ -1.84
ATG3YNR007C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
ATG3YNR007C GZF3P42944 551 aaKnown RBP3.57□□□□□ -1.84
ATG3YNR007C RET2P43621 546 aa3.57□□□□□ -1.84
ATG3YNR007C YIP4P53093 235 aa3.57□□□□□ -1.84
ATG3YNR007C ATP23P53722 227 aa3.57□□□□□ -1.84
ATG3YNR007C SQS1P53866 767 aaKnown RBP3.57□□□□□ -1.84
ATG3YNR007C MTQ2Q03920 221 aaPredicted RBP3.57□□□□□ -1.84
ATG3YNR007C YDL073WQ07454 984 aa3.57□□□□□ -1.84
ATG3YNR007C RPL7BQ12213 244 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms