RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W MNT2P53059 558 aa3.98□□□□□ -1.77
NUP85YJR042W SHE10P53075 577 aa3.98□□□□□ -1.77
NUP85YJR042W HST1P53685 503 aa3.98□□□□□ -1.77
NUP85YJR042W YNR071CP53757 342 aa3.98□□□□□ -1.77
NUP85YJR042W HEF3P53978 1044 aaKnown RBP3.98□□□□□ -1.77
NUP85YJR042W VPS9P54787 451 aa3.98□□□□□ -1.77
NUP85YJR042W THI22Q06490 572 aa3.98□□□□□ -1.77
NUP85YJR042W YCG1Q06680 1035 aa3.98□□□□□ -1.77
NUP85YJR042W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
NUP85YJR042W YIG1Q08956 461 aa3.98□□□□□ -1.77
NUP85YJR042W PHM7Q12252 991 aa3.98□□□□□ -1.77
NUP85YJR042W TPK1P06244 397 aa3.97□□□□□ -1.77
NUP85YJR042W ADE3P07245 946 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W VAS1P07806 1104 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W YEL076C-AP0CX16 216 aa3.97□□□□□ -1.77
NUP85YJR042W YLR464WP0CX17 216 aa3.97□□□□□ -1.77
NUP85YJR042W RNA1P11745 407 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W POL3P15436 1097 aa3.97□□□□□ -1.77
NUP85YJR042W DAP2P18962 818 aa3.97□□□□□ -1.77
NUP85YJR042W RRP43P25359 394 aaPredicted RBP3.97□□□□□ -1.77
NUP85YJR042W URA7P28274 579 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W GYP6P32806 458 aa3.97□□□□□ -1.77
NUP85YJR042W RPT5P33297 434 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W HEL1P36113 551 aa3.97□□□□□ -1.77
NUP85YJR042W YKR018CP36114 725 aa3.97□□□□□ -1.77
NUP85YJR042W YBR287WP38355 427 aa3.97□□□□□ -1.77
NUP85YJR042W SRP68P38687 599 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W YHR131CP38835 850 aa3.97□□□□□ -1.77
NUP85YJR042W LYS9P38999 446 aa3.97□□□□□ -1.77
NUP85YJR042W SAW1P39735 261 aa3.97□□□□□ -1.77
NUP85YJR042W YEL076CP39971 216 aa3.97□□□□□ -1.77
NUP85YJR042W THI6P41835 540 aa3.97□□□□□ -1.77
NUP85YJR042W TCB2P48231 1178 aa3.97□□□□□ -1.77
NUP85YJR042W CCM1P48237 864 aaPredicted RBP3.97□□□□□ -1.77
NUP85YJR042W YDR514CQ04408 483 aa3.97□□□□□ -1.77
NUP85YJR042W YPS7Q06325 596 aa3.97□□□□□ -1.77
NUP85YJR042W PSF3Q12146 194 aa3.97□□□□□ -1.77
NUP85YJR042W PTC5Q12511 572 aa3.97□□□□□ -1.77
NUP85YJR042W AUS1Q08409 1394 aa3.97□□□□□ -1.77
NUP85YJR042W NOT3P06102 836 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W OM45P16547 393 aa3.97□□□□□ -1.77
NUP85YJR042W YKL077WP36081 392 aa3.97□□□□□ -1.77
NUP85YJR042W STB6P36085 766 aa3.97□□□□□ -1.77
NUP85YJR042W SRO77P38163 1010 aa3.97□□□□□ -1.77
NUP85YJR042W UBP13P38187 747 aa3.97□□□□□ -1.77
NUP85YJR042W DLD3P39976 496 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W PSF2P40359 213 aa3.97□□□□□ -1.77
NUP85YJR042W MNP1P53163 194 aaPredicted RBP3.97□□□□□ -1.77
NUP85YJR042W RPN14P53196 417 aa3.97□□□□□ -1.77
NUP85YJR042W NNF2P53253 936 aa3.97□□□□□ -1.77
NUP85YJR042W YGR266WP53326 701 aa3.97□□□□□ -1.77
NUP85YJR042W RCM1P53972 490 aa3.97□□□□□ -1.77
NUP85YJR042W TIM50Q02776 476 aa3.97□□□□□ -1.77
NUP85YJR042W HAS1Q03532 505 aaKnown RBP3.97□□□□□ -1.77
NUP85YJR042W IWR1Q07532 353 aaPredicted RBP3.97□□□□□ -1.77
NUP85YJR042W MDM38Q08179 573 aa3.97□□□□□ -1.77
NUP85YJR042W ISA2Q12425 185 aa3.97□□□□□ -1.77
NUP85YJR042W GCN4P03069 281 aa3.96□□□□□ -1.78
NUP85YJR042W CDC4P07834 779 aa3.96□□□□□ -1.78
NUP85YJR042W LAT1P12695 482 aaKnown RBP3.96□□□□□ -1.78
NUP85YJR042W SNT1P25357 1226 aa3.96□□□□□ -1.78
NUP85YJR042W KIP1P28742 1111 aa3.96□□□□□ -1.78
NUP85YJR042W NAM7P30771 971 aaKnown RBP3.96□□□□□ -1.78
NUP85YJR042W SUR1P33300 382 aa3.96□□□□□ -1.78
NUP85YJR042W UGA2P38067 497 aa3.96□□□□□ -1.78
NUP85YJR042W KSP1P38691 1029 aaKnown RBP3.96□□□□□ -1.78
NUP85YJR042W GIC1P38785 314 aa3.96□□□□□ -1.78
NUP85YJR042W CTM1P38818 585 aa3.96□□□□□ -1.78
NUP85YJR042W KHA1P40309 873 aa3.96□□□□□ -1.78
NUP85YJR042W RLP7P40693 322 aaKnown RBP3.96□□□□□ -1.78
NUP85YJR042W ALY2P47029 1046 aa3.96□□□□□ -1.78
NUP85YJR042W SHE4P51534 789 aa3.96□□□□□ -1.78
NUP85YJR042W JJJ1P53863 590 aa3.96□□□□□ -1.78
NUP85YJR042W CIK1Q01649 594 aa3.96□□□□□ -1.78
NUP85YJR042W YAP6Q03935 383 aa3.96□□□□□ -1.78
NUP85YJR042W DON1Q05610 365 aa3.96□□□□□ -1.78
NUP85YJR042W YLR407WQ06070 228 aa3.96□□□□□ -1.78
NUP85YJR042W YDL073WQ07454 984 aa3.96□□□□□ -1.78
NUP85YJR042W MLH2Q07980 695 aa3.96□□□□□ -1.78
NUP85YJR042W IME1P21190 360 aa3.95□□□□□ -1.78
NUP85YJR042W MRPL25P23369 157 aa3.95□□□□□ -1.78
NUP85YJR042W CWH43P25618 953 aa3.95□□□□□ -1.78
NUP85YJR042W TRK2P28584 889 aa3.95□□□□□ -1.78
NUP85YJR042W MGM1P32266 881 aa3.95□□□□□ -1.78
NUP85YJR042W EFT1P32324 842 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W MRP20P32387 263 aa3.95□□□□□ -1.78
NUP85YJR042W BFR1P38934 470 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78 RIP-Chip
NUP85YJR042W GDI1P39958 451 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W YEL025CP39991 1188 aa3.95□□□□□ -1.78
NUP85YJR042W LAM5P43560 674 aa3.95□□□□□ -1.78
NUP85YJR042W GYP7P48365 746 aa3.95□□□□□ -1.78
NUP85YJR042W ALT1P52893 592 aa3.95□□□□□ -1.78
NUP85YJR042W SFB2P53953 876 aa3.95□□□□□ -1.78
NUP85YJR042W TOF2Q02208 771 aa3.95□□□□□ -1.78
NUP85YJR042W ARX1Q03862 593 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W RBA50Q04418 439 aa3.95□□□□□ -1.78
NUP85YJR042W UFO1Q04511 668 aa3.95□□□□□ -1.78
NUP85YJR042W DBP9Q06218 594 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W SOG2Q08817 791 aa3.95□□□□□ -1.78
NUP85YJR042W CTI6Q08923 506 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms