RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	EXO70	P19658	623 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	CNA1	P23287	553 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	RRT12	P25381	491 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	BCS1	P32839	456 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	RRT2	P38332	387 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	HIS2	P38635	335 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	DYS1	P38791	387 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	SPC72	P39723	622 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	MET18	P40469	1032 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	IRR1	P40541	1150 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	RFX1	P48743	811 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	DRN1	P53255	507 aa	Known RBP	5.29	□□□□□ -1.56
PDI1	YCL043C	YGR111W	P53265	400 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	ATG26	Q06321	1198 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	NOP12	Q08208	459 aa	Known RBP	5.29	□□□□□ -1.56
PDI1	YCL043C	ECM3	Q99252	613 aa		5.29	□□□□□ -1.56
PDI1	YCL043C	COX4	P04037	155 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	RPS3	P05750	240 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	ASP3-2	P0CX77	362 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	ASP3-3	P0CX78	362 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	ASP3-4	P0CX79	362 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	ASP3-1	P0CZ17	362 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	RPL4A	P10664	362 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	WHI2	P12611	486 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	COX11	P19516	300 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	SKG6	P32900	734 aa	Predicted RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	MAP2	P38174	421 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	PEX18	P38855	283 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	IES5	P40060	125 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	SBE2	P42223	864 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	SKP2	P42843	763 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	ZAP1	P47043	880 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	RPL4B	P49626	362 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	YGL108C	P53139	140 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	USE1	P53146	245 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	YGR016W	P53209	190 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	BRE5	P53741	515 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	DAK1	P54838	584 aa	Known RBP	5.28	□□□□□ -1.56
PDI1	YCL043C	BUD7	Q08754	746 aa		5.28	□□□□□ -1.56
PDI1	YCL043C	BI2	P03873	423 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	BI4	P03879	638 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ATR1	P13090	542 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ADY2	P25613	283 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	PRR1	P28708	518 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	MSS51	P32335	436 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	SEC6	P32844	805 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	DUR3	P33413	735 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	GPT2	P36148	743 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	SPC97	P38863	823 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
PDI1	YCL043C	ASG1	P40467	964 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	DPH1	P40487	425 aa	Known RBP	5.27	□□□□□ -1.57
PDI1	YCL043C	LAM5	P43560	674 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ULI1	P43604	169 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	PUS2	P53167	370 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ESF2	P53743	316 aa	Known RBP	5.27	□□□□□ -1.57
PDI1	YCL043C	OSH6	Q02201	448 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	SWP1	Q02795	286 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ATG16	Q03818	150 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	FMP42	Q04991	504 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	YIG1	Q08956	461 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	ICL2	Q12031	575 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	MNL2	Q12205	849 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	BI3	Q9ZZW7	517 aa		5.27	□□□□□ -1.57
PDI1	YCL043C	SEM1	O94742	89 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	CMD1	P06787	147 aa	Known RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	MPH2	P0CD99	609 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	YML002W	P0CF17	737 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	HEM15	P16622	393 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	RPS5	P26783	225 aa	Known RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	CAP1	P28495	268 aa	Known RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	DBF4	P32325	704 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	GYP6	P32806	458 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	VHC1	P38329	1120 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	BOL3	P39724	118 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	SAH1	P39954	449 aa	Known RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	YEL023C	P39992	682 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	PRK1	P40494	810 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	LIA1	P47120	325 aa	Known RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	NUT2	Q06213	157 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	YDL114W	Q07530	308 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	ADY3	Q07732	790 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	RKM1	Q08961	583 aa	Predicted RBP	5.26	□□□□□ -1.57
PDI1	YCL043C	ACM1	Q08981	209 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	SUT2	Q12286	268 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	FRT1	Q99332	602 aa		5.26	□□□□□ -1.57
PDI1	YCL043C	GCR1	P07261	785 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	HEM1	P09950	548 aa	Predicted RBP	5.25	□□□□□ -1.57
PDI1	YCL043C	HSC82	P15108	705 aa	Known RBP	5.25	□□□□□ -1.57
PDI1	YCL043C	THR1	P17423	357 aa	Known RBP	5.25	□□□□□ -1.57
PDI1	YCL043C	GLN3	P18494	730 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	AFT1	P22149	690 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	SLY41	P22215	453 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	ISF1	P32488	338 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	SLX5	P32828	619 aa	Known RBP	5.25	□□□□□ -1.57
PDI1	YCL043C	NUP120	P35729	1037 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	TPO5	P36029	618 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	RCN1	P36054	211 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	TBS1	P38114	1094 aa		5.25	□□□□□ -1.57
PDI1	YCL043C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.25	□□□□□ -1.57	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms