RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSH1	YBR161W	SAP4	P53036	818 aa		4.81	□□□□□ -1.64
CSH1	YBR161W	MLC2	Q06580	163 aa		4.81	□□□□□ -1.64
CSH1	YBR161W	YOL114C	Q12322	202 aa		4.81	□□□□□ -1.64
CSH1	YBR161W	ATP4	P05626	244 aa		4.8	□□□□□ -1.64
CSH1	YBR161W	CTT1	P06115	562 aa		4.8	□□□□□ -1.64
CSH1	YBR161W	RNR3	P21672	869 aa	Known RBP	4.8	□□□□□ -1.64
CSH1	YBR161W	RPS7A	P26786	190 aa	Known RBP	4.8	□□□□□ -1.64
CSH1	YBR161W	COS12	P53053	380 aa		4.8	□□□□□ -1.64
CSH1	YBR161W	LGE1	Q02796	332 aa	Known RBP	4.8	□□□□□ -1.64
CSH1	YBR161W	TRS31	Q03337	283 aa		4.8	□□□□□ -1.64
CSH1	YBR161W	ENT2	Q05785	613 aa		4.8	□□□□□ -1.64
CSH1	YBR161W	GAL1	P04385	528 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	RPL7A	P05737	244 aa	Known RBP	4.79	□□□□□ -1.64
CSH1	YBR161W	YPK1	P12688	680 aa	Known RBP	4.79	□□□□□ -1.64
CSH1	YBR161W	AAD3	P25612	363 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	PTP2	P29461	750 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	SDH8	P38345	138 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	PIP2	P52960	996 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	IMO32	P53219	342 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	ARG7	Q04728	441 aa		4.79	□□□□□ -1.64
CSH1	YBR161W	RPL7B	Q12213	244 aa	Known RBP	4.79	□□□□□ -1.64
CSH1	YBR161W	HEM1	P09950	548 aa	Predicted RBP	4.78	□□□□□ -1.64
CSH1	YBR161W	MRPL9	P31334	269 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	LNP1	P38878	278 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	HIS6	P40545	261 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	MAD3	P47074	515 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	TEP1	P53916	434 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	ACS1	Q01574	713 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	CRD1	Q07560	283 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	CRT10	Q08226	957 aa		4.78	□□□□□ -1.64
CSH1	YBR161W	SEC3	P33332	1336 aa	Known RBP	4.77	□□□□□ -1.65
CSH1	YBR161W	LEU2	P04173	364 aa	Predicted RBP	4.77	□□□□□ -1.65
CSH1	YBR161W	PMA2	P19657	947 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	PRE2	P30656	287 aa	Known RBP	4.77	□□□□□ -1.65
CSH1	YBR161W	CDC5	P32562	705 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	YPT10	P38146	199 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	POL31	P46957	487 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	WAR1	Q03631	944 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	VPS64	Q03944	604 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	AAD4	Q07747	329 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
CSH1	YBR161W	NDJ1	Q12366	352 aa		4.77	□□□□□ -1.65
CSH1	YBR161W	AAC1	P04710	309 aa		4.76	□□□□□ -1.65
CSH1	YBR161W	HOM2	P13663	365 aa	Known RBP	4.76	□□□□□ -1.65
CSH1	YBR161W	PRP45	P28004	379 aa	Predicted RBP	4.76	□□□□□ -1.65
CSH1	YBR161W	QRI7	P43122	407 aa		4.76	□□□□□ -1.65
CSH1	YBR161W	YFL015C	P43578	164 aa		4.76	□□□□□ -1.65
CSH1	YBR161W	HIM1	Q06674	414 aa		4.76	□□□□□ -1.65
CSH1	YBR161W	YMR084W	A2P2R3	262 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	ERG11	P10614	530 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	ORC2	P32833	620 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	APM3	P38153	483 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	RRP8	P38961	392 aa	Known RBP	4.75	□□□□□ -1.65
CSH1	YBR161W	STT3	P39007	718 aa	Known RBP	4.75	□□□□□ -1.65
CSH1	YBR161W	NOP2	P40991	618 aa	Known RBP	4.75	□□□□□ -1.65
CSH1	YBR161W	TAX4	P47030	604 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	YJL043W	P47053	257 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	MRI1	Q06489	411 aa	Known RBP	4.75	□□□□□ -1.65
CSH1	YBR161W	OSW1	Q08692	278 aa		4.75	□□□□□ -1.65
CSH1	YBR161W	YCR061W	P25639	631 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	MTG2	P38860	518 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	VPS27	P40343	622 aa	Known RBP	4.74	□□□□□ -1.65
CSH1	YBR161W	OPT1	P40897	799 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	MOT3	P54785	490 aa	Known RBP	4.74	□□□□□ -1.65
CSH1	YBR161W	CRF1	Q04930	467 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	PCL8	Q08966	492 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	AHA1	Q12449	350 aa	Known RBP	4.74	□□□□□ -1.65
CSH1	YBR161W	YNL162W-A	Q3E7A8	72 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	YER175W-A	Q8TGU4	54 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	AI5_ALPHA	Q9ZZX1	630 aa		4.74	□□□□□ -1.65
CSH1	YBR161W	MSS18	P08593	268 aa		4.73	□□□□□ -1.65
CSH1	YBR161W	GDA1	P32621	518 aa		4.73	□□□□□ -1.65
CSH1	YBR161W	RPC34	P32910	317 aa		4.73	□□□□□ -1.65
CSH1	YBR161W	HOT13	P36078	116 aa		4.73	□□□□□ -1.65
CSH1	YBR161W	COQ11	Q05892	277 aa		4.73	□□□□□ -1.65
CSH1	YBR161W	BRE1	Q07457	700 aa	Known RBP	4.73	□□□□□ -1.65
CSH1	YBR161W	RRP6	Q12149	733 aa	Known RBP	4.73	□□□□□ -1.65
CSH1	YBR161W	PIF1	P07271	859 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	POL3	P15436	1097 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	PHO81	P17442	1178 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	SIR1	P21691	654 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	MSH1	P25846	959 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	YHL041W	P38730	149 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	ARB1	P40024	610 aa	Known RBP	4.72	□□□□□ -1.65
CSH1	YBR161W	COG2	P53271	262 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	YNL092W	P53934	400 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	YML119W	Q03208	357 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	ARA2	Q04212	335 aa		4.72	□□□□□ -1.65
CSH1	YBR161W	ARO9	P38840	513 aa	Predicted RBP	4.71	□□□□□ -1.66
CSH1	YBR161W	MAM1	P40065	302 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	CAB2	P40506	365 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	PAP2	P53632	584 aa	Known RBP	4.71	□□□□□ -1.66
CSH1	YBR161W	ESF2	P53743	316 aa	Known RBP	4.71	□□□□□ -1.66
CSH1	YBR161W	AAT1	Q01802	451 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	UBP16	Q02863	499 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	THI7	Q05998	598 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	AIM6	Q07716	390 aa		4.71	□□□□□ -1.66
CSH1	YBR161W	AQY1	P0CD91	305 aa		4.7	□□□□□ -1.66
CSH1	YBR161W	NUP1	P20676	1076 aa		4.7	□□□□□ -1.66
CSH1	YBR161W	AMD2	P22580	549 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms