RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TCP10L2B9ZVM9 353 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 SPDYE2Q495Y8 402 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 DDX4Q9NQI0 724 aaKnown RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 ADARB2Q9NS39 739 aaKnown RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 HACL1Q9UJ83 578 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 PALD1Q9ULE6 856 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 ZMYM6O95789 1325 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 ECM29Q5VYK3 1845 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 CDK5RAP2Q96SN8 1893 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 USP17L12C9JPN9 530 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 USP17L21D6R901 530 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 IDI2Q9BXS1 227 aa20.8■□□□□ 0.92
PHGDH-230ENST00000641927 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 MKRN1Q9UHC7 482 aaKnown RBP20.8■□□□□ 0.92
PHGDH-230ENST00000641927 BAZ2AQ9UIF9 1905 aaKnown RBP20.79■□□□□ 0.92
PHGDH-230ENST00000641927 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
PHGDH-230ENST00000641927 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-230ENST00000641927 CYP21A2P08686 494 aa20.79■□□□□ 0.92
PHGDH-230ENST00000641927 CTR9Q6PD62 1173 aa20.79■□□□□ 0.92
PHGDH-230ENST00000641927 NAV1Q8NEY1 1877 aa20.78■□□□□ 0.92
PHGDH-230ENST00000641927 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
PHGDH-230ENST00000641927 OSBPL5Q9H0X9 879 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-230ENST00000641927 IQCA1LA6NCM1 817 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 CYP2D6P10635 497 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 EPHX2P34913 555 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 PPARAQ07869 468 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-230ENST00000641927 RASEFQ8IZ41 740 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 FAM198AQ9UFP1 575 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 SNX14Q9Y5W7 946 aa20.77■□□□□ 0.92
PHGDH-230ENST00000641927 ASTN2O75129 1339 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-230ENST00000641927 FOCADQ5VW36 1801 aa20.77■□□□□ 0.91
PHGDH-230ENST00000641927 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.91
PHGDH-230ENST00000641927 TAF6LQ9Y6J9 622 aa20.77■□□□□ 0.91
PHGDH-230ENST00000641927 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-230ENST00000641927 ANGEL2Q5VTE6 544 aaKnown RBP20.76■□□□□ 0.91
PHGDH-230ENST00000641927 ZFPM1Q8IX07 1006 aa20.76■□□□□ 0.91
PHGDH-230ENST00000641927 SCAF8Q9UPN6 1271 aaKnown RBP20.76■□□□□ 0.91
PHGDH-230ENST00000641927 ENTPD3O75355 529 aa20.75■□□□□ 0.91
PHGDH-230ENST00000641927 ANAPC15P60006 121 aa20.75■□□□□ 0.91
PHGDH-230ENST00000641927 SBK1Q52WX2 424 aa20.75■□□□□ 0.91
PHGDH-230ENST00000641927 TSHZ2Q9NRE2 1034 aa20.75■□□□□ 0.91
PHGDH-230ENST00000641927 SMIM22K7EJ46 135 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
PHGDH-230ENST00000641927 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
PHGDH-230ENST00000641927 TNNI2P48788 182 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 EVX2Q03828 476 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 TNFAIP1Q13829 316 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 EAPPQ56P03 285 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-230ENST00000641927 C12orf60Q5U649 245 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 TTC6Q86TZ1 520 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 TBC1D10CQ8IV04 446 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 ZNF526Q8TF50 670 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-230ENST00000641927 GGA3Q9NZ52 723 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 MYH1P12882 1939 aa20.74■□□□□ 0.91
PHGDH-230ENST00000641927 HLA-DOAP06340 250 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 PLCD1P51178 756 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 KRT32Q14532 448 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 USP50Q70EL3 339 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-230ENST00000641927 KCNB2Q92953 911 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 NBPF3Q9H094 633 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 TAF1DQ9H5J8 278 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-230ENST00000641927 E7EWF7 191 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 FAM151AQ8WW52 585 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 JAKMIP1Q96N16 626 aaKnown RBP20.73■□□□□ 0.91
PHGDH-230ENST00000641927 DHX36Q9H2U1 1008 aaKnown RBP20.73■□□□□ 0.91
PHGDH-230ENST00000641927 TOMM22Q9NS69 142 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
PHGDH-230ENST00000641927 SCN4AP35499 1836 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 LAMA4Q16363 1823 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 CNTNAP1P78357 1384 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 DDX60LQ5H9U9 1706 aaKnown RBP20.72■□□□□ 0.91
PHGDH-230ENST00000641927 POTECB2RU33 542 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 FAM83AQ86UY5 434 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
PHGDH-230ENST00000641927 TMEM39BQ9GZU3 492 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 RRAGCQ9HB90 399 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 ANAPC4Q9UJX5 808 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 LAMB1P07942 1786 aa20.72■□□□□ 0.91
PHGDH-230ENST00000641927 DDTLA6NHG4 134 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-230ENST00000641927 TRDNQ13061 729 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 RASA3Q14644 834 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 TSGA10IPQ3SY00 556 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 AKNAD1Q5T1N1 836 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 STOX1Q6ZVD7 989 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 DYNLL2Q96FJ2 89 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 CSRNP1Q96S65 589 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 KIF2CQ99661 725 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 RNF41Q9H4P4 317 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-230ENST00000641927 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
PHGDH-230ENST00000641927 CASTP20810 708 aaKnown RBP20.7■□□□□ 0.91
PHGDH-230ENST00000641927 PSMA5P28066 241 aa20.7■□□□□ 0.91
PHGDH-230ENST00000641927 PDE4BQ07343 736 aa20.7■□□□□ 0.91
PHGDH-230ENST00000641927 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.91
PHGDH-230ENST00000641927 SH3BP5LQ7L8J4 393 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms