RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 DENND2AQ9ULE3 1009 aa18.79■□□□□ 0.6
SRRM4-204ENST00000641899 PTPRCP08575 1304 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 EYA2O00167 538 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 ELNP15502 786 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 PTPRAP18433 802 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 PABPC4Q13310 644 aaKnown RBP eCLIP18.78■□□□□ 0.6
SRRM4-204ENST00000641899 DIXDC1Q155Q3 683 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 PAK6Q9NQU5 681 aaPredicted RBP18.78■□□□□ 0.6
SRRM4-204ENST00000641899 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
SRRM4-204ENST00000641899 CTNND1O60716 968 aaKnown RBP18.77■□□□□ 0.6
SRRM4-204ENST00000641899 MNX1P50219 401 aaPredicted RBP18.77■□□□□ 0.6
SRRM4-204ENST00000641899 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
SRRM4-204ENST00000641899 FAM198AQ9UFP1 575 aa18.77■□□□□ 0.6
SRRM4-204ENST00000641899 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
SRRM4-204ENST00000641899 AFG3L2Q9Y4W6 797 aa18.77■□□□□ 0.6
SRRM4-204ENST00000641899 SALL1Q9NSC2 1324 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 PRDX5P30044 214 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 BMP8BP34820 402 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 PAWRQ96IZ0 340 aaKnown RBP18.76■□□□□ 0.59
SRRM4-204ENST00000641899 CRISPLD2Q9H0B8 497 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
SRRM4-204ENST00000641899 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 AGTPBP1Q9UPW5 1226 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 SZT2Q5T011 3432 aa18.76■□□□□ 0.59
SRRM4-204ENST00000641899 PHF20L1A8MW92 1017 aa18.75■□□□□ 0.59
SRRM4-204ENST00000641899 GCLCP48506 637 aaPredicted RBP18.75■□□□□ 0.59
SRRM4-204ENST00000641899 RGS3P49796 1198 aa18.75■□□□□ 0.59
SRRM4-204ENST00000641899 FAM110CQ1W6H9 321 aa18.75■□□□□ 0.59
SRRM4-204ENST00000641899 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
SRRM4-204ENST00000641899 DZIP1Q86YF9 867 aaKnown RBP18.75■□□□□ 0.59
SRRM4-204ENST00000641899 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
SRRM4-204ENST00000641899 ZSWIM8A7E2V4 1837 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 TRIM75PA6NK02 468 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 HMGCRP04035 888 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 ATP2B3Q16720 1220 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 SPTY2D1Q68D10 685 aaPredicted RBP18.74■□□□□ 0.59
SRRM4-204ENST00000641899 ANKRD13CQ8N6S4 541 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
SRRM4-204ENST00000641899 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRRM4-204ENST00000641899 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
SRRM4-204ENST00000641899 LRCH3Q96II8 777 aa18.73■□□□□ 0.59
SRRM4-204ENST00000641899 HMX1Q9NP08 348 aaPredicted RBP18.73■□□□□ 0.59
SRRM4-204ENST00000641899 RANBP2P49792 3224 aaKnown RBP18.73■□□□□ 0.59
SRRM4-204ENST00000641899 CIAO1O76071 339 aa18.72■□□□□ 0.59
SRRM4-204ENST00000641899 MAP3K10Q02779 954 aa18.72■□□□□ 0.59
SRRM4-204ENST00000641899 C7orf61Q8IZ16 206 aa18.72■□□□□ 0.59
SRRM4-204ENST00000641899 RPTORQ8N122 1335 aa18.72■□□□□ 0.59
SRRM4-204ENST00000641899 SOX1O00570 391 aaPredicted RBP18.71■□□□□ 0.59
SRRM4-204ENST00000641899 ZFPM1Q8IX07 1006 aa18.71■□□□□ 0.59
SRRM4-204ENST00000641899 DEFB123Q8N688 67 aa18.71■□□□□ 0.59
SRRM4-204ENST00000641899 GDF15Q99988 308 aa18.71■□□□□ 0.59
SRRM4-204ENST00000641899 USP44Q9H0E7 712 aa18.71■□□□□ 0.59
SRRM4-204ENST00000641899 ATRNL1Q5VV63 1379 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 ZBTB22O15209 634 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 ANP32CO43423 234 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
SRRM4-204ENST00000641899 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
SRRM4-204ENST00000641899 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
SRRM4-204ENST00000641899 C11orf49Q9H6J7 331 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 GAKO14976 1311 aa18.7■□□□□ 0.58
SRRM4-204ENST00000641899 TBC1D12O60347 775 aa18.69■□□□□ 0.58
SRRM4-204ENST00000641899 PICALMQ13492 652 aa18.69■□□□□ 0.58
SRRM4-204ENST00000641899 TDHQ8IZJ6 230 aa18.69■□□□□ 0.58
SRRM4-204ENST00000641899 MRPL50Q8N5N7 158 aaKnown RBP18.69■□□□□ 0.58
SRRM4-204ENST00000641899 FAM163AQ96GL9 167 aaPredicted RBP18.69■□□□□ 0.58
SRRM4-204ENST00000641899 AS3MTQ9HBK9 375 aa18.69■□□□□ 0.58
SRRM4-204ENST00000641899 ABCF2Q9UG63 623 aa18.69■□□□□ 0.58
SRRM4-204ENST00000641899 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 TRMT44Q8IYL2 757 aaKnown RBP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 ZNF280CQ8ND82 737 aa18.68■□□□□ 0.58
SRRM4-204ENST00000641899 SIL1Q9H173 461 aa18.68■□□□□ 0.58
SRRM4-204ENST00000641899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 ZMYND8Q9ULU4 1186 aaPredicted RBP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 PDS5AQ29RF7 1337 aaKnown RBP18.68■□□□□ 0.58
SRRM4-204ENST00000641899 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
SRRM4-204ENST00000641899 BTDP43251 543 aa18.67■□□□□ 0.58
SRRM4-204ENST00000641899 GSTO1P78417 241 aa18.67■□□□□ 0.58
SRRM4-204ENST00000641899 ATG9AQ7Z3C6 839 aa18.67■□□□□ 0.58
SRRM4-204ENST00000641899 DDTLA6NHG4 134 aaPredicted RBP18.66■□□□□ 0.58
SRRM4-204ENST00000641899 LDHCP07864 332 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 PHKA1P46020 1223 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 SPP2Q13103 211 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 SH3BP5LQ7L8J4 393 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
SRRM4-204ENST00000641899 DIS3LQ8TF46 1054 aaKnown RBP18.66■□□□□ 0.58
SRRM4-204ENST00000641899 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
SRRM4-204ENST00000641899 UBE2OQ9C0C9 1292 aaKnown RBP18.66■□□□□ 0.58
SRRM4-204ENST00000641899 IRX3P78415 501 aaPredicted RBP18.65■□□□□ 0.58
SRRM4-204ENST00000641899 PDE3AQ14432 1141 aa18.65■□□□□ 0.58
SRRM4-204ENST00000641899 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
SRRM4-204ENST00000641899 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
SRRM4-204ENST00000641899 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
SRRM4-204ENST00000641899 MROH7-TTC4A0A0A0MT08 1334 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms