RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 C11orf49Q9H6J7 331 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 PTPRAP18433 802 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 DIXDC1Q155Q3 683 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 GADL1Q6ZQY3 521 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 TBC1D22AQ8WUA7 517 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 OGDHLQ9ULD0 1010 aa12.29□□□□□ -0.44
PHGDH-212ENST00000641247 GRM8O00222 908 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 FAM109BQ6ICB4 259 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-212ENST00000641247 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
PHGDH-212ENST00000641247 VPS37DQ86XT2 251 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 VGLL2Q8N8G2 317 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 RAPGEFL1Q9UHV5 662 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
PHGDH-212ENST00000641247 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 PEX10O60683 326 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 VAMP4O75379 141 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 FRAT2O75474 233 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-212ENST00000641247 COL6A1P12109 1028 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 LRRC26Q2I0M4 334 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 TRIB2Q92519 343 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 COA7Q96BR5 231 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-212ENST00000641247 SLC45A1Q9Y2W3 748 aa12.27□□□□□ -0.45
PHGDH-212ENST00000641247 HMGCRP04035 888 aa12.26□□□□□ -0.45
PHGDH-212ENST00000641247 SMCR8Q8TEV9 937 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-212ENST00000641247 CDX2Q99626 313 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-212ENST00000641247 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-212ENST00000641247 USP40Q9NVE5 1235 aa12.26□□□□□ -0.45
PHGDH-212ENST00000641247 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
PHGDH-212ENST00000641247 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
PHGDH-212ENST00000641247 DDTLA6NHG4 134 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-212ENST00000641247 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 PDE8BO95263 885 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-212ENST00000641247 FGFR2P21802 821 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 PRDX5P30044 214 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 MAP3K21Q5TCX8 1036 aa12.25□□□□□ -0.45
PHGDH-212ENST00000641247 COL2A1P02458 1487 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-212ENST00000641247 CYP2B6P20813 491 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 COL9A1P20849 921 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 FAM110CQ1W6H9 321 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 LHX8Q68G74 356 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 AGTPBP1Q9UPW5 1226 aa12.24□□□□□ -0.45
PHGDH-212ENST00000641247 MGAMO43451 1857 aa12.23□□□□□ -0.45
PHGDH-212ENST00000641247 CCND3P30281 292 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-212ENST00000641247 RGS3P49796 1198 aa12.23□□□□□ -0.45
PHGDH-212ENST00000641247 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
PHGDH-212ENST00000641247 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
PHGDH-212ENST00000641247 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-212ENST00000641247 DDX4Q9NQI0 724 aaKnown RBP12.23□□□□□ -0.45
PHGDH-212ENST00000641247 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
PHGDH-212ENST00000641247 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-212ENST00000641247 MAST3O60307 1309 aa12.22□□□□□ -0.45
PHGDH-212ENST00000641247 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
PHGDH-212ENST00000641247 MAFAQ8NHW3 353 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-212ENST00000641247 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
PHGDH-212ENST00000641247 TTYH1Q9H313 450 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-212ENST00000641247 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
PHGDH-212ENST00000641247 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.45
PHGDH-212ENST00000641247 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.45
PHGDH-212ENST00000641247 CACNB2Q08289 660 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-212ENST00000641247 CCL14Q16627 93 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-212ENST00000641247 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
PHGDH-212ENST00000641247 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
PHGDH-212ENST00000641247 SPP2Q13103 211 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 SHHQ15465 462 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 CCDC27Q2M243 656 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 Q3C1V9 767 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 ASCC2Q9H1I8 757 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-212ENST00000641247 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
PHGDH-212ENST00000641247 LRRFIP2Q9Y608 721 aaKnown RBP12.2□□□□□ -0.46
PHGDH-212ENST00000641247 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 UTYO14607 1347 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 ENTPD3O75355 529 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 HMGCS2P54868 508 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 USP6NLQ92738 828 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms