RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
PHGDH-208ENST00000641023 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
PHGDH-208ENST00000641023 STK11IPQ8N1F8 1099 aa20.24■□□□□ 0.83
PHGDH-208ENST00000641023 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
PHGDH-208ENST00000641023 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
PHGDH-208ENST00000641023 CHD4Q14839 1912 aa20.24■□□□□ 0.83
PHGDH-208ENST00000641023 CCDC69A6NI79 296 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 USP17L21D6R901 530 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 ZBTB43O43298 467 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 FIBPO43427 364 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 CPLX2Q6PUV4 134 aaKnown RBP20.23■□□□□ 0.83
PHGDH-208ENST00000641023 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
PHGDH-208ENST00000641023 ARPP21Q9UBL0 812 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-208ENST00000641023 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
PHGDH-208ENST00000641023 COA1Q9GZY4 146 aa20.23■□□□□ 0.83
PHGDH-208ENST00000641023 CDKL5O76039 1030 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
PHGDH-208ENST00000641023 WTAPQ15007 396 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-208ENST00000641023 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■■■□□ 15.2
PHGDH-208ENST00000641023 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 DUOX1Q9NRD9 1551 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 FSD2A1L4K1 749 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 H0YIN7 160 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 FGRP09769 529 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 FDPSP14324 419 aaKnown RBP20.22■□□□□ 0.83
PHGDH-208ENST00000641023 PPP4CP60510 307 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 UBE2HP62256 183 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
PHGDH-208ENST00000641023 TCHHQ07283 1943 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 DIXDC1Q155Q3 683 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 SBK1Q52WX2 424 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 MICU3Q86XE3 530 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 SLF2Q8IX21 1173 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
PHGDH-208ENST00000641023 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 GADD45BO75293 160 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-208ENST00000641023 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-208ENST00000641023 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 SCAND2PQ9GZW5 306 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-208ENST00000641023 ORC3Q9UBD5 711 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-208ENST00000641023 LTBP1Q14766 1721 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 FAM205AQ6ZU69 1335 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 CYP2D7A0A087X1C5 515 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 PPFIA3O75145 1194 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.82
PHGDH-208ENST00000641023 USP5P45974 858 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 BAG6P46379 1132 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 RESTQ13127 1097 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 GRIK5Q16478 980 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 ZSCAN23Q3MJ62 389 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 KIAA1551Q9HCM1 1747 aa20.2■□□□□ 0.82
PHGDH-208ENST00000641023 GOLGA8AA7E2F4 631 aa20.19■□□□□ 0.82
PHGDH-208ENST00000641023 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
PHGDH-208ENST00000641023 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
PHGDH-208ENST00000641023 MCM9Q9NXL9 1143 aa20.19■□□□□ 0.82
PHGDH-208ENST00000641023 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
PHGDH-208ENST00000641023 RXRAP19793 462 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 AMOTL1Q8IY63 956 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 EYA3Q99504 573 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 RCAN1P53805 252 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 ZNF445P59923 1031 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 GTF2IP78347 998 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 PDE4BQ07343 736 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 C8orf76Q96K31 380 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
PHGDH-208ENST00000641023 BAZ2AQ9UIF9 1905 aaKnown RBP20.18■□□□□ 0.82
PHGDH-208ENST00000641023 ELP1O95163 1332 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 SH3RF3Q8TEJ3 882 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 FAM163AQ96GL9 167 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 RTFDC1Q9BY42 306 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 TMEM63CQ9P1W3 806 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 SUGT1Q9Y2Z0 365 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 TNKSO95271 1327 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 GPR75-ASB3A0A0A6YYF3 556 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 G3V3G9 751 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 ORC4O43929 436 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 PLCG2P16885 1265 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 CDC27P30260 824 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 NT5C2P49902 561 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 MRE11P49959 708 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 CCDC144CPQ8IYA2 1237 aa20.17■□□□□ 0.82
PHGDH-208ENST00000641023 RBM27Q9P2N5 1060 aaKnown RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 MKRN1Q9UHC7 482 aaKnown RBP20.17■□□□□ 0.82
PHGDH-208ENST00000641023 CCDC196A0A1B0GTZ2 297 aa20.16■□□□□ 0.82
PHGDH-208ENST00000641023 PRDM1O75626 825 aa20.16■□□□□ 0.82
PHGDH-208ENST00000641023 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-208ENST00000641023 FOSBP53539 338 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms