RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
SCARB2-224ENST00000640880 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-224ENST00000640880 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 B2RBV5 119 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 GFRA3O60609 400 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 DGAT1O75907 488 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 ITGA6P23229 1130 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 MAP1SQ66K74 1059 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-224ENST00000640880 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-224ENST00000640880 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
SCARB2-224ENST00000640880 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 TMX1Q9H3N1 280 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 SH2B1Q9NRF2 756 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-224ENST00000640880 TRIM33Q9UPN9 1127 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
SCARB2-224ENST00000640880 ATE1O95260 518 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 IKBKEQ14164 716 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 TAF7LQ5H9L4 462 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 PERM1Q5SV97 790 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 ZNF468Q5VIY5 522 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-224ENST00000640880 C6orf15Q6UXA7 325 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-224ENST00000640880 PDZD3Q86UT5 571 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 CRIPAKQ8N1N5 446 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 C19orf47Q8N9M1 422 aaKnown RBP9.27□□□□□ -0.93
SCARB2-224ENST00000640880 THAP3Q8WTV1 239 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-224ENST00000640880 FEZ1Q99689 392 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 SMG9Q9H0W8 520 aaKnown RBP9.27□□□□□ -0.93
SCARB2-224ENST00000640880 ANTXR1Q9H6X2 564 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 SLC6A14Q9UN76 642 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.93
SCARB2-224ENST00000640880 EEA1Q15075 1411 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 A0A1W2PQH9 124 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 GPR25O00155 361 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 DIAPH1O60610 1272 aaKnown RBP9.26□□□□□ -0.93
SCARB2-224ENST00000640880 SIN3BO75182 1162 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 PCBP4P57723 403 aaKnown RBP9.26□□□□□ -0.93
SCARB2-224ENST00000640880 LAPTM4AQ15012 233 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 TKFCQ3LXA3 575 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 SCARA3Q6AZY7 606 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 ELMSAN1Q6PJG2 1045 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 SPATC1Q76KD6 591 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 TTC6Q86TZ1 520 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 NAGPAQ9UK23 515 aa9.26□□□□□ -0.93
SCARB2-224ENST00000640880 GSTP1P09211 210 aaKnown RBP9.25□□□□□ -0.93
SCARB2-224ENST00000640880 CDK8P49336 464 aa9.25□□□□□ -0.93
SCARB2-224ENST00000640880 AP3B2Q13367 1082 aa9.25□□□□□ -0.93
SCARB2-224ENST00000640880 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
SCARB2-224ENST00000640880 RPUSD2Q8IZ73 545 aaKnown RBP9.25□□□□□ -0.93
SCARB2-224ENST00000640880 PTCH2Q9Y6C5 1203 aa9.25□□□□□ -0.93
SCARB2-224ENST00000640880 GUCY2CP25092 1073 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 CABP4P57796 275 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 AMPD3Q01432 767 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 SSRP1Q08945 709 aaKnown RBP9.24□□□□□ -0.93
SCARB2-224ENST00000640880 LRRFIP1Q32MZ4 808 aaKnown RBP9.24□□□□□ -0.93
SCARB2-224ENST00000640880 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 TM9SF2Q99805 663 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 ZMYM5Q9UJ78 669 aa9.24□□□□□ -0.93
SCARB2-224ENST00000640880 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 HTR3BO95264 441 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 BMP4P12644 408 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 EPHA1P21709 976 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 CDC27P30260 824 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 MRM1Q6IN84 353 aaKnown RBP9.23□□□□□ -0.93
SCARB2-224ENST00000640880 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-224ENST00000640880 JMYQ8N9B5 988 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 ST13P5Q8NFI4 369 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-224ENST00000640880 TMEM40Q8WWA1 233 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 TNFRSF25Q93038 417 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 ACSBG1Q96GR2 724 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 ZC3H12CQ9C0D7 883 aaKnown RBP9.23□□□□□ -0.93
SCARB2-224ENST00000640880 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
SCARB2-224ENST00000640880 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 SOX1O00570 391 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-224ENST00000640880 C2CD2LO14523 706 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 SELPP16109 830 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 ADH7P40394 386 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 MASP1P48740 699 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 TCEA2Q15560 299 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 WIPI1Q5MNZ9 446 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-224ENST00000640880 LPIN3Q9BQK8 851 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 CTTNBP2Q8WZ74 1663 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 IGF1RP08069 1367 aa9.22□□□□□ -0.93
SCARB2-224ENST00000640880 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
SCARB2-224ENST00000640880 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.93
SCARB2-224ENST00000640880 CEP170Q5SW79 1584 aa9.21□□□□□ -0.93
SCARB2-224ENST00000640880 CDC14CA4D256 554 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 UPK3BL1B0FP48 263 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 UPK3BL2E5RIL1 263 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 ASMTLO95671 621 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 CDC25BP30305 580 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 GSTM4Q03013 218 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 PLEKHG6Q3KR16 790 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 GPBAR1Q8TDU6 330 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 CACNA2D2Q9NY47 1150 aa9.21□□□□□ -0.94
SCARB2-224ENST00000640880 DDX56Q9NY93 547 aaKnown RBP9.21□□□□□ -0.94
SCARB2-224ENST00000640880 CLASP1Q7Z460 1538 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms