RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 KCNB2Q92953 911 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 MKNK2Q9HBH9 465 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 KRT82Q9NSB4 513 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 EGFL7Q9UHF1 273 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 TMEM265A0A087WTH1 108 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 NDUFB5O43674 189 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 GRM2Q14416 872 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 ANGEL2Q5VTE6 544 aaKnown RBP7.49□□□□□ -1.21
AP3S1-209ENST00000640413 ISL2Q96A47 359 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 NIF3L1Q9GZT8 377 aa7.49□□□□□ -1.21
AP3S1-209ENST00000640413 SSU72Q9NP77 194 aaKnown RBP7.49□□□□□ -1.21
AP3S1-209ENST00000640413 MESP2Q0VG99 397 aa7.48□□□□□ -1.21
AP3S1-209ENST00000640413 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
AP3S1-209ENST00000640413 PDZD3Q86UT5 571 aa7.48□□□□□ -1.21
AP3S1-209ENST00000640413 EPS8L3Q8TE67 593 aaKnown RBP7.48□□□□□ -1.21
AP3S1-209ENST00000640413 SLC38A3Q99624 504 aa7.48□□□□□ -1.21
AP3S1-209ENST00000640413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.48□□□□□ -1.21
AP3S1-209ENST00000640413 GPN3Q9UHW5 284 aaPredicted RBP7.48□□□□□ -1.21
AP3S1-209ENST00000640413 LRRC10BA6NIK2 292 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 GPR182O15218 404 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 DTHD1Q6ZMT9 781 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
AP3S1-209ENST00000640413 STK35Q8TDR2 534 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
AP3S1-209ENST00000640413 KRTAP4-2Q9BYR5 136 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
AP3S1-209ENST00000640413 FCGRTP55899 365 aa7.46□□□□□ -1.22
AP3S1-209ENST00000640413 TMC1Q8TDI8 760 aa7.46□□□□□ -1.22
AP3S1-209ENST00000640413 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
AP3S1-209ENST00000640413 DNAJC25Q9H1X3 360 aa7.46□□□□□ -1.22
AP3S1-209ENST00000640413 TMEM39AQ9NV64 488 aa7.46□□□□□ -1.22
AP3S1-209ENST00000640413 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 IGHA2P01877 340 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 MLANAQ16655 118 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 FAM214BQ7L5A3 538 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 FLAD1Q8NFF5 587 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
AP3S1-209ENST00000640413 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
AP3S1-209ENST00000640413 PPP2R3AQ06190 1150 aa7.44□□□□□ -1.22
AP3S1-209ENST00000640413 ZC3H12AQ5D1E8 599 aaKnown RBP7.44□□□□□ -1.22
AP3S1-209ENST00000640413 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
AP3S1-209ENST00000640413 SULF2Q8IWU5 870 aa7.44□□□□□ -1.22
AP3S1-209ENST00000640413 RNF214Q8ND24 703 aa7.44□□□□□ -1.22
AP3S1-209ENST00000640413 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
AP3S1-209ENST00000640413 ZP2Q05996 745 aa7.43□□□□□ -1.22
AP3S1-209ENST00000640413 IKZF1Q13422 519 aa7.43□□□□□ -1.22
AP3S1-209ENST00000640413 KCNMB1Q16558 191 aa7.43□□□□□ -1.22
AP3S1-209ENST00000640413 MAP1SQ66K74 1059 aaPredicted RBP7.43□□□□□ -1.22
AP3S1-209ENST00000640413 CSRNP1Q96S65 589 aa7.43□□□□□ -1.22
AP3S1-209ENST00000640413 CSADQ9Y600 493 aa7.43□□□□□ -1.22
AP3S1-209ENST00000640413 ARNTP27540 789 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 ERVK-24P63145 666 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 MPRIPQ6WCQ1 1025 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 GPBAR1Q8TDU6 330 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 ASB11Q8WXH4 323 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 LIN37Q96GY3 246 aaPredicted RBP7.42□□□□□ -1.22
AP3S1-209ENST00000640413 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
AP3S1-209ENST00000640413 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 FYB2Q5VWT5 728 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 UBE3DQ7Z6J8 389 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 CILP2Q8IUL8 1156 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 C1orf115Q9H7X2 142 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 AKAP2Q9Y2D5 859 aa7.41□□□□□ -1.22
AP3S1-209ENST00000640413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.4□□□□□ -1.22
AP3S1-209ENST00000640413 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 BCO2Q9BYV7 579 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 CBX8Q9HC52 389 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 FAM53CQ9NYF3 392 aa7.4□□□□□ -1.22
AP3S1-209ENST00000640413 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
AP3S1-209ENST00000640413 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
AP3S1-209ENST00000640413 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 ZNF865P0CJ78 1059 aaPredicted RBP7.38□□□□□ -1.23
AP3S1-209ENST00000640413 NME2P22392 152 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 CFPP27918 469 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 NTF4P34130 210 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 BHLHE22Q8NFJ8 381 aaPredicted RBP7.38□□□□□ -1.23
AP3S1-209ENST00000640413 NLRP2Q9NX02 1062 aa7.38□□□□□ -1.23
AP3S1-209ENST00000640413 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 GRIN3AQ8TCU5 1115 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 EMILIN2Q9BXX0 1053 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
AP3S1-209ENST00000640413 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
AP3S1-209ENST00000640413 GNAT3A8MTJ3 354 aa7.36□□□□□ -1.23
AP3S1-209ENST00000640413 EOMESO95936 686 aa7.36□□□□□ -1.23
AP3S1-209ENST00000640413 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms