RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 GPAA1O43292 621 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 FAM227BQ96M60 508 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 VPS18Q9P253 973 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 MTRF1LQ9UGC7 380 aaKnown RBP16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 VAV2P52735 878 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 MTUS1Q9ULD2 1270 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 PRDM1O75626 825 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 TTC14Q96N46 770 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 ARHGEF10LQ9HCE6 1279 aa16.51■□□□□ 0.23
HNRNPU-226ENST00000640218 ZEB2O60315 1214 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 TXKP42681 527 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 TNNC1P63316 161 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 SEL1L2Q5TEA6 688 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 APPBP2Q92624 585 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 FAM169AQ9Y6X4 670 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 IVLP07476 585 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 CAPN2P17655 700 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 ATP2A2P16615 1042 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 LEO1Q8WVC0 666 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 A1BGP04217 495 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 LGR6Q9HBX8 967 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 POLR2DO15514 142 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 KRT9P35527 623 aa16.5■□□□□ 0.23
HNRNPU-226ENST00000640218 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 SMC6Q96SB8 1091 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 PSMC4P43686 418 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 UBLCP1Q8WVY7 318 aaPredicted RBP16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 KCNH3Q9ULD8 1083 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 NUP153P49790 1475 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 CAPN15O75808 1086 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 CTDSPL2Q05D32 466 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 SMTNP53814 917 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 KIFAP3Q92845 792 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 DDX23Q9BUQ8 820 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.233e-10■□□□□ 10.5
HNRNPU-226ENST00000640218 CALCOCO2Q13137 446 aa16.49■□□□□ 0.23
HNRNPU-226ENST00000640218 TNFAIP3P21580 790 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 TUBB4BP68371 445 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 CPLX4Q7Z7G2 160 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 SPATA24Q86W54 205 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 STX10O60499 249 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 MYCLP12524 364 aaPredicted RBP16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 PPP1R2P41236 205 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
HNRNPU-226ENST00000640218 IL13P35225 146 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 CFAP58Q5T655 872 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 SPOPO43791 374 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 UIMC1Q96RL1 719 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 MAP7D1Q3KQU3 841 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 CCDC14Q49A88 953 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 CALUO43852 315 aaPredicted RBP16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 ABT1Q9ULW3 272 aaKnown RBP16.47■□□□□ 0.23
HNRNPU-226ENST00000640218 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 DPY19L2Q6NUT2 758 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 WDR66Q8TBY9 1149 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 IFT74Q96LB3 600 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 USP19O94966 1318 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 UAP1Q16222 522 aaPredicted RBP16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 DIS3L2Q8IYB7 885 aaKnown RBP16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 CSGALNACT2Q8N6G5 542 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 KIAA1524Q8TCG1 905 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 PHKBQ93100 1093 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 ARHGEF35A5YM69 484 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
HNRNPU-226ENST00000640218 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.22
HNRNPU-226ENST00000640218 CNGA1P29973 690 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms