RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 SYNMO15061 1565 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 UBASH3AP57075 661 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.42
SCN1B-208ENST00000640135 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 SKAP1Q86WV1 359 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 USP44Q9H0E7 712 aa12.46□□□□□ -0.42
SCN1B-208ENST00000640135 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.46□□□□□ -0.42
SCN1B-208ENST00000640135 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 LMBR1Q8WVP7 490 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC17Q96LX7 622 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 PNMA6EA0A0J9YXQ4 647 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 FAM200AQ8TCP9 573 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-208ENST00000640135 NT5C2P49902 561 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 ZKSCAN3Q9BRR0 538 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 TFAP4Q01664 338 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 TM6SF1Q9BZW5 370 aa12.45□□□□□ -0.42
SCN1B-208ENST00000640135 PDE8BO95263 885 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 CA8P35219 290 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 DNM2P50570 870 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 NLRX1Q86UT6 975 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 ZBTB1Q9Y2K1 713 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 V9GY48 417 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-208ENST00000640135 ADGRL3Q9HAR2 1447 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 ADRA2BP18089 450 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 CHRNDQ07001 517 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 GCOM1H8Y6P7 765 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-208ENST00000640135 MYZAPP0CAP1 466 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 TCP10Q12799 353 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 ATP10DQ9P241 1426 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 KCNQ3O43525 872 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-208ENST00000640135 TUBB4AP04350 444 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 CCT6AP40227 531 aaKnown RBP12.44□□□□□ -0.42
SCN1B-208ENST00000640135 TAF12Q16514 161 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 SUPT20HL1Q3ZLR7 823 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 TSPYL1Q9H0U9 437 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
SCN1B-208ENST00000640135 PRDM15P57071 1507 aaPredicted RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 ELP1O95163 1332 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 DIP2BQ9P265 1576 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 UBE3CQ15386 1083 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 NSMFQ6X4W1 530 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 PRDM1O75626 825 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 SLC8A3P57103 927 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
SCN1B-208ENST00000640135 PPARAQ07869 468 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 CNPY2Q9Y2B0 182 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 ARHGEF35A5YM69 484 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 HACE1Q8IYU2 909 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
SCN1B-208ENST00000640135 TET3O43151 1660 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 M0QZ92 97 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC117Q8IWD4 279 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC97Q96F63 343 aaPredicted RBP12.42□□□□□ -0.42
SCN1B-208ENST00000640135 MMRN2Q9H8L6 949 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 KIAA0754O94854 1291 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 SNX16P57768 344 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 STRN3Q13033 797 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 TMCO3Q6UWJ1 677 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
SCN1B-208ENST00000640135 KRT83P78385 493 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 SP4Q02446 784 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 SWAP70Q9UH65 585 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 MRVI1Q9Y6F6 885 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 AGLP35573 1532 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 KIF1BO60333 1816 aa12.42□□□□□ -0.42
SCN1B-208ENST00000640135 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 USP17L21D6R901 530 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 NPR1P16066 1061 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
SCN1B-208ENST00000640135 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
SCN1B-208ENST00000640135 HAUS7Q99871 368 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms