RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 GZF1Q9H116 711 aaPredicted RBP8.82□□□□□ -1
CCDC7-216ENST00000640058 LRRC4CQ9HCJ2 640 aa8.82□□□□□ -1
CCDC7-216ENST00000640058 DCDC2CA8MYV0 355 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 CYP26A1O43174 497 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 NEFMP07197 916 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 FOSL1P15407 271 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 ZC3H12AQ5D1E8 599 aaKnown RBP8.81□□□□□ -1
CCDC7-216ENST00000640058 PCNX4Q63HM2 1172 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 LLGL2Q6P1M3 1020 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
CCDC7-216ENST00000640058 FRMD6Q96NE9 622 aa8.81□□□□□ -1
CCDC7-216ENST00000640058 SSU72Q9NP77 194 aaKnown RBP8.81□□□□□ -1
CCDC7-216ENST00000640058 DUSP27Q5VZP5 1158 aa8.8□□□□□ -1
CCDC7-216ENST00000640058 DTX1Q86Y01 620 aa8.8□□□□□ -1
CCDC7-216ENST00000640058 TRIM37O94972 964 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 COL19A1Q14993 1142 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 CPSF6Q16630 551 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC7-216ENST00000640058 PPM1JQ5JR12 505 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 ISL2Q96A47 359 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 PICK1Q9NRD5 415 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 PARP2Q9UGN5 583 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 PCDHA4Q9UN74 947 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 AK5Q9Y6K8 562 aa8.79□□□□□ -1
CCDC7-216ENST00000640058 FAM87AP0C7U9 286 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 LRRC14Q15048 493 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 MSMPQ1L6U9 139 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 C12orf40Q86WS4 652 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 FAM161BQ96MY7 647 aa8.78□□□□□ -1
CCDC7-216ENST00000640058 GP2P55259 537 aaKnown RBP8.77□□□□□ -1.01
CCDC7-216ENST00000640058 ERVK-24P63145 666 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 PSMD2Q13200 908 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 CCDC85BQ15834 202 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-216ENST00000640058 MAP3K11Q16584 847 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC7-216ENST00000640058 RNF214Q8ND24 703 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 PCOLCE2Q9UKZ9 415 aa8.77□□□□□ -1.01
CCDC7-216ENST00000640058 FGD1P98174 961 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 TAGLNQ01995 201 aaKnown RBP8.76□□□□□ -1.01
CCDC7-216ENST00000640058 PTPN11Q06124 597 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-216ENST00000640058 CCDC27Q2M243 656 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 TTBK2Q6IQ55 1244 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 OGFOD3Q6PK18 319 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 SV2BQ7L1I2 683 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 ELMO3Q96BJ8 720 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 CYP8B1Q9UNU6 501 aa8.76□□□□□ -1.01
CCDC7-216ENST00000640058 OAS3Q9Y6K5 1087 aaKnown RBP8.76□□□□□ -1.01
CCDC7-216ENST00000640058 LEFTY1O75610 366 aa8.75□□□□□ -1.01
CCDC7-216ENST00000640058 WNT11O96014 354 aa8.75□□□□□ -1.01
CCDC7-216ENST00000640058 XPCQ01831 940 aaPredicted RBP8.75□□□□□ -1.01
CCDC7-216ENST00000640058 UBE3DQ7Z6J8 389 aa8.75□□□□□ -1.01
CCDC7-216ENST00000640058 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
CCDC7-216ENST00000640058 ANGEL1Q9UNK9 670 aaKnown RBP8.75□□□□□ -1.01
CCDC7-216ENST00000640058 CYP27C1Q4G0S4 372 aa8.74□□□□□ -1.01
CCDC7-216ENST00000640058 TOP6BLQ8N6T0 577 aa8.74□□□□□ -1.01
CCDC7-216ENST00000640058 FAM181AQ8N9Y4 354 aa8.74□□□□□ -1.01
CCDC7-216ENST00000640058 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 DAB2P98082 770 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 INPP5AQ14642 412 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.73□□□□□ -1.01
CCDC7-216ENST00000640058 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 GAL3ST3Q96A11 431 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
CCDC7-216ENST00000640058 NTF4P34130 210 aa8.72□□□□□ -1.01
CCDC7-216ENST00000640058 CDK8P49336 464 aa8.72□□□□□ -1.01
CCDC7-216ENST00000640058 SEPT6Q14141 434 aa8.72□□□□□ -1.01
CCDC7-216ENST00000640058 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
CCDC7-216ENST00000640058 LMNB1P20700 586 aa8.71□□□□□ -1.02
CCDC7-216ENST00000640058 ZBTB37Q5TC79 503 aa8.71□□□□□ -1.02
CCDC7-216ENST00000640058 DUSP23Q9BVJ7 150 aa8.71□□□□□ -1.02
CCDC7-216ENST00000640058 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
CCDC7-216ENST00000640058 U3KQE9 123 aa8.71□□□□□ -1.02
CCDC7-216ENST00000640058 LIG3P49916 1009 aa8.7□□□□□ -1.02
CCDC7-216ENST00000640058 RING1Q06587 406 aa8.7□□□□□ -1.02
CCDC7-216ENST00000640058 WIPI1Q5MNZ9 446 aaPredicted RBP8.7□□□□□ -1.02
CCDC7-216ENST00000640058 CDC37L1Q7L3B6 337 aa8.7□□□□□ -1.02
CCDC7-216ENST00000640058 TMC4Q7Z404 712 aa8.7□□□□□ -1.02
CCDC7-216ENST00000640058 VSIG10LQ86VR7 867 aa8.7□□□□□ -1.02
CCDC7-216ENST00000640058 F6X3S4 739 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 CTSHP09668 335 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 IRAK1P51617 712 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 ARHGAP27Q6ZUM4 889 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 PLD6Q8N2A8 252 aaKnown RBP8.69□□□□□ -1.02
CCDC7-216ENST00000640058 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
CCDC7-216ENST00000640058 FANCGO15287 622 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 PRNPP04156 253 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 SCARA3Q6AZY7 606 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 HDXQ7Z353 690 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 TP53INP2Q8IXH6 220 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 VTI1BQ9UEU0 232 aa8.68□□□□□ -1.02
CCDC7-216ENST00000640058 RPS26P62854 115 aaKnown RBP8.67□□□□□ -1.02
CCDC7-216ENST00000640058 TAF1CQ15572 869 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms