RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 NLRP1Q9C000 1473 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CHD1O14646 1710 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CTAGE9A4FU28 777 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 ZFP91Q96JP5 570 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CAPZA3Q96KX2 299 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
SCARB2-216ENST00000639300 FTOQ9C0B1 505 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARB2-216ENST00000639300 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-216ENST00000639300 PLCG2P16885 1265 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 TTC38Q5R3I4 469 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 BTBD18B2RXH4 712 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 AKR1B15C9JRZ8 316 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-216ENST00000639300 UFL1O94874 794 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 CETN1Q12798 172 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 KIF5AQ12840 1032 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 POLA2Q14181 598 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 PFKFB1P16118 471 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 NLRP12P59046 1061 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 PNOCQ13519 176 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 ERMNQ8TAM6 284 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCARB2-216ENST00000639300 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 MROH5Q6ZUA9 1318 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 ERCC3P19447 782 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCARB2-216ENST00000639300 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
SCARB2-216ENST00000639300 IFFO1Q0D2I5 559 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
SCARB2-216ENST00000639300 SEPT7Q16181 437 aaKnown RBP16.3■□□□□ 0.2
SCARB2-216ENST00000639300 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
SCARB2-216ENST00000639300 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 PHACTR2O75167 634 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
SCARB2-216ENST00000639300 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
SCARB2-216ENST00000639300 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
SCARB2-216ENST00000639300 CTNNBL1Q8WYA6 563 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-216ENST00000639300 PDE8BO95263 885 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 TBC1D8BQ0IIM8 1120 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 NAA15Q9BXJ9 866 aaKnown RBP16.29■□□□□ 0.2
SCARB2-216ENST00000639300 KRT86O43790 486 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 TFAP4Q01664 338 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 POSTNQ15063 836 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 SERTAD1Q9UHV2 236 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-216ENST00000639300 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 ADCY9O60503 1353 aa16.29■□□□□ 0.2
SCARB2-216ENST00000639300 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 CNGA4Q8IV77 575 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 MAST3O60307 1309 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 TXKP42681 527 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 EVCP57679 992 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 GOLGA1Q92805 767 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 GSTTP1A0A1W2PQM5 241 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 TACC1O75410 805 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 TUBB4AP04350 444 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 NDUFA8P51970 172 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 PPARAQ07869 468 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 MTX1Q13505 466 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SCARB2-216ENST00000639300 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 CLIC4Q9Y696 253 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 ANKRD62A6NC57 917 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 KRT83P78385 493 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms