RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 C16orf45Q96MC5 204 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 H7C1W4 665 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 CASQ2O14958 399 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 CHUKO15111 745 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 HOXD10P28358 340 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 RABL6Q3YEC7 729 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 BBOF1Q8ND07 529 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 PRM3Q9NNZ6 103 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 ANGPTL3Q9Y5C1 460 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 TRIML2Q8N7C3 387 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 SH3TC2Q8TF17 1288 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 HPS3Q969F9 1004 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 SNX5Q9Y5X3 404 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 POLR3GO15318 223 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 ZBED4O75132 1171 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 NLRP5P59047 1200 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 AKAP17AQ02040 695 aaKnown RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 IRGCQ6NXR0 463 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 TSC1Q92574 1164 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 SLC27A2O14975 620 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 HPDP32754 393 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-209ENST00000639244 TMF1P82094 1093 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 C9orf131Q5VYM1 1079 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 MAATS1Q7Z4T9 603 aa4.84□□□□□ -1.63
SCN3A-209ENST00000639244 TBX3O15119 743 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 TMOD1P28289 359 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 NCBP1Q09161 790 aaKnown RBP4.84□□□□□ -1.64
SCN3A-209ENST00000639244 PLEKHG6Q3KR16 790 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 ZBTB41Q5SVQ8 909 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 NBPF14Q5TI25 921 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 LLGL2Q6P1M3 1020 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 CCAR2Q8N163 923 aaKnown RBP4.84□□□□□ -1.64
SCN3A-209ENST00000639244 CCT7Q99832 543 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 PRKAG2Q9UGJ0 569 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 TRPC6Q9Y210 931 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 TGFB3P10600 412 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 PDE4DQ08499 809 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 GRIK3Q13003 919 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 MRGBPQ9NV56 204 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 EMC3Q9P0I2 261 aa4.84□□□□□ -1.64
SCN3A-209ENST00000639244 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-209ENST00000639244 CTIFO43310 598 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 DNAJC6O75061 913 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 BASP1P80723 227 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ZBED6P86452 979 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF653Q96CK0 615 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 QTRT2Q9H974 415 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 RNF8O76064 485 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC148Q8NFR7 591 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 KCNH8Q96L42 1107 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 GPR101Q96P66 508 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 SIN3AQ96ST3 1273 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 EIF2AQ9BY44 585 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PLSCR2Q9NRY7 297 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 KDRP35968 1356 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 TSPAN1O60635 241 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 LUC7L3O95232 432 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 CORO7P57737 925 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 RBM6P78332 1123 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 MYBPC3Q14896 1274 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 DRC3Q9H069 523 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PDRG1Q9NUG6 133 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 EVPLQ92817 2033 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 TRIM64A6NGJ6 449 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 TRIM64BA6NI03 449 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 IFRD1O00458 451 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 GYS1P13807 737 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ATP5DP30049 168 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 SLC8A1P32418 973 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ROR2Q01974 943 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PSMD6Q15008 389 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 CLPPQ16740 277 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 FBXO18Q8NFZ0 1043 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ABCG4Q9H172 646 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PARVBQ9HBI1 364 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ANKIB1Q9P2G1 1089 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 PFDN1O60925 122 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ANGPTL8Q6UXH0 198 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 SPDYE1Q8NFV5 336 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 RPGRIP1Q96KN7 1286 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 MTRF1LQ9UGC7 380 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 HNRNPCL2B2RXH8 293 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 HNRNPCL1O60812 293 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 LMAN1P49257 510 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 METTL24Q5JXM2 366 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF365Q70YC5 407 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 NEK11Q8NG66 645 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 NLRP2Q9NX02 1062 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 HDAC4P56524 1084 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 SMYD1Q8NB12 490 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 API5Q9BZZ5 524 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 ESF1Q9H501 851 aaKnown RBP4.83□□□□□ -1.64
SCN3A-209ENST00000639244 VCPKMTQ9H867 229 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms