RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
SCARB2-209ENST00000638409 NRDCO43847 1150 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 SENP7Q9BQF6 1050 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 PPCSQ9HAB8 311 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 MSRB2Q9Y3D2 182 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 ZNF500O60304 480 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-209ENST00000638409 CD53P19397 219 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 KLF15Q9UIH9 416 aa9.56□□□□□ -0.88
SCARB2-209ENST00000638409 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
SCARB2-209ENST00000638409 TRIM37O94972 964 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 SEC24BO95487 1268 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 RAB27AP51159 221 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 CFAP53Q96M91 514 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 KDRP35968 1356 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 SMAD7O15105 426 aaKnown RBP9.55□□□□□ -0.88
SCARB2-209ENST00000638409 PDGFAP04085 211 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 IL2RBP14784 551 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-209ENST00000638409 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 SERTAD1Q9UHV2 236 aa9.55□□□□□ -0.88
SCARB2-209ENST00000638409 R3HCC1Q9Y3T6 440 aaKnown RBP9.55□□□□□ -0.88
SCARB2-209ENST00000638409 ASMTLO95671 621 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 EPHA4P54764 986 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 MCL1Q07820 350 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 Q3C1V9 767 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 ASTLQ6HA08 431 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-209ENST00000638409 SLC4A10Q6U841 1118 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 KSR2Q6VAB6 950 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-209ENST00000638409 FGAP02671 866 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 CDC27P30260 824 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 SH3BP5LQ7L8J4 393 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-209ENST00000638409 PTPRHQ9HD43 1115 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 PRKAG3Q9UGI9 489 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 OVOS2A0A0G2JMS6 1433 aa9.54□□□□□ -0.88
SCARB2-209ENST00000638409 CFAP69A5D8W1 941 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 CLCN6P51797 869 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 HDAC1Q13547 482 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-209ENST00000638409 NBPF20Q3BBV1 942 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 C8orf34Q49A92 452 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 CPLX3Q8WVH0 158 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 ZIM2Q9NZV7 527 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 BCL9O00512 1426 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 KCNQ2O43526 872 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 MYL1P05976 194 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 TNS2Q63HR2 1409 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 MEGF6O75095 1541 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 SHANK3Q9BYB0 1731 aa9.53□□□□□ -0.88
SCARB2-209ENST00000638409 ANP32CO43423 234 aa9.52□□□□□ -0.88
SCARB2-209ENST00000638409 SCNN1DP51172 638 aa9.52□□□□□ -0.88
SCARB2-209ENST00000638409 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.88
SCARB2-209ENST00000638409 KRT26Q7Z3Y9 468 aa9.52□□□□□ -0.88
SCARB2-209ENST00000638409 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.88
SCARB2-209ENST00000638409 PRPF3O43395 683 aaKnown RBP9.52□□□□□ -0.89
SCARB2-209ENST00000638409 KATNA1O75449 491 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 CCNYL3P0C7X3 344 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 JUNDP17535 347 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 DDB1Q16531 1140 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
SCARB2-209ENST00000638409 RBSNQ9H1K0 784 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 EXOC5O00471 708 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 NXPE4Q6UWF7 544 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 MYO1HQ8N1T3 1032 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 USHBP1Q8N6Y0 703 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 NUDCQ9Y266 331 aa9.52□□□□□ -0.89
SCARB2-209ENST00000638409 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-209ENST00000638409 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-209ENST00000638409 SOX9P48436 509 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 EPHB1P54762 984 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 IFRD2Q12894 506 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-209ENST00000638409 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 THNSL2Q86YJ6 484 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 RAPGEF4Q8WZA2 1011 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 C2orf49Q9BVC5 232 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-209ENST00000638409 UBP1Q9NZI7 540 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 PPT2Q9UMR5 302 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 BRICD5Q6PL45 260 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 LRP10Q7Z4F1 713 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 TTC8Q8TAM2 541 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 RELTQ969Z4 430 aa9.51□□□□□ -0.89
SCARB2-209ENST00000638409 SMAD5Q99717 465 aaKnown RBP9.51□□□□□ -0.89
SCARB2-209ENST00000638409 PDPK1O15530 556 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 MYCLP1P12525 358 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-209ENST00000638409 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 CCDC184Q52MB2 194 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 SULT6B1Q6IMI4 303 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms