RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 SDR42E1Q8WUS8 393 aa23.33■■□□□ 1.33
HLA-A-209ENST00000638375 TMEM39BQ9GZU3 492 aa23.33■■□□□ 1.33
HLA-A-209ENST00000638375 TRAF5O00463 557 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 TNNI2P48788 182 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 FMR1Q06787 632 aaKnown RBP eCLIP23.32■■□□□ 1.32
HLA-A-209ENST00000638375 PRAMEF18Q5VWM3 479 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 CDAN1Q8IWY9 1227 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 FAM151AQ8WW52 585 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 MKRN1Q9UHC7 482 aaKnown RBP23.32■■□□□ 1.32
HLA-A-209ENST00000638375 SLC4A4Q9Y6R1 1079 aa23.32■■□□□ 1.32
HLA-A-209ENST00000638375 CDC45O75419 566 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 USP5P45974 858 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 OSBPL5Q9H0X9 879 aaPredicted RBP23.31■■□□□ 1.32
HLA-A-209ENST00000638375 PPP2R3BQ9Y5P8 575 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 FOCADQ5VW36 1801 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 CCDC171Q6TFL3 1326 aa23.31■■□□□ 1.32
HLA-A-209ENST00000638375 FOXP2O15409 715 aa23.3■■□□□ 1.32
HLA-A-209ENST00000638375 SH3BP5LQ7L8J4 393 aa23.3■■□□□ 1.32
HLA-A-209ENST00000638375 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
HLA-A-209ENST00000638375 RPAP1Q9BWH6 1393 aaPredicted RBP23.29■■□□□ 1.32
HLA-A-209ENST00000638375 GSG1L2A8MUP6 293 aa23.29■■□□□ 1.32
HLA-A-209ENST00000638375 VPS53Q5VIR6 699 aa23.29■■□□□ 1.32
HLA-A-209ENST00000638375 CDCA5Q96FF9 252 aa23.29■■□□□ 1.32
HLA-A-209ENST00000638375 RAD50Q92878 1312 aa23.29■■□□□ 1.32
HLA-A-209ENST00000638375 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
HLA-A-209ENST00000638375 GNAT2P19087 354 aa23.28■■□□□ 1.32
HLA-A-209ENST00000638375 FSTL1Q12841 308 aa23.28■■□□□ 1.32
HLA-A-209ENST00000638375 NBPF12Q5TAG4 269 aaPredicted RBP23.28■■□□□ 1.32
HLA-A-209ENST00000638375 RUFY2Q8WXA3 655 aa23.28■■□□□ 1.32
HLA-A-209ENST00000638375 EPB41L4AQ9HCS5 686 aaPredicted RBP23.28■■□□□ 1.32
HLA-A-209ENST00000638375 ATP8A2Q9NTI2 1148 aa23.28■■□□□ 1.32
HLA-A-209ENST00000638375 COL2A1P02458 1487 aaPredicted RBP23.28■■□□□ 1.32
HLA-A-209ENST00000638375 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
HLA-A-209ENST00000638375 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
HLA-A-209ENST00000638375 ATRNL1Q5VV63 1379 aa23.27■■□□□ 1.32
HLA-A-209ENST00000638375 SSC5DA1L4H1 1573 aa23.27■■□□□ 1.32
HLA-A-209ENST00000638375 SGSM2O43147 1006 aa23.27■■□□□ 1.32
HLA-A-209ENST00000638375 SAP30BPQ9UHR5 308 aaKnown RBP23.27■■□□□ 1.32
HLA-A-209ENST00000638375 NAV1Q8NEY1 1877 aa23.26■■□□□ 1.31
HLA-A-209ENST00000638375 PATL2C9JE40 543 aaKnown RBP23.26■■□□□ 1.31
HLA-A-209ENST00000638375 ESYT1Q9BSJ8 1104 aa23.26■■□□□ 1.31
HLA-A-209ENST00000638375 PALD1Q9ULE6 856 aa23.26■■□□□ 1.31
HLA-A-209ENST00000638375 ZSCAN29Q8IWY8 852 aaPredicted RBP23.25■■□□□ 1.31
HLA-A-209ENST00000638375 MCM9Q9NXL9 1143 aa23.25■■□□□ 1.31
HLA-A-209ENST00000638375 APPP05067 770 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 HSPD1P10809 573 aaKnown RBP23.24■■□□□ 1.31
HLA-A-209ENST00000638375 MFAP1P55081 439 aaKnown RBP23.24■■□□□ 1.31
HLA-A-209ENST00000638375 EVX2Q03828 476 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 SLC4A8Q2Y0W8 1093 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 GIMAP6Q6P9H5 292 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 IFNL3Q8IZI9 196 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 CSRNP1Q96S65 589 aa23.24■■□□□ 1.31
HLA-A-209ENST00000638375 SLURP2P0DP57 97 aa23.23■■□□□ 1.31
HLA-A-209ENST00000638375 CYP2D6P10635 497 aa23.23■■□□□ 1.31
HLA-A-209ENST00000638375 DHX36Q9H2U1 1008 aaKnown RBP23.23■■□□□ 1.31
HLA-A-209ENST00000638375 CYP2D7A0A087X1C5 515 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 SUPT20HL1Q3ZLR7 823 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 CTR9Q6PD62 1173 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 CASC1Q6TDU7 716 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 DDRGK1Q96HY6 314 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 ZNF408Q9H9D4 720 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 SIPA1L1O43166 1804 aa23.22■■□□□ 1.31
HLA-A-209ENST00000638375 MYH1P12882 1939 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 USP17L12C9JPN9 530 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 USP17L21D6R901 530 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 SMIM22K7EJ46 135 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 CELF2O95319 508 aaKnown RBP23.21■■□□□ 1.31
HLA-A-209ENST00000638375 POLR3DP05423 398 aaPredicted RBP23.21■■□□□ 1.31
HLA-A-209ENST00000638375 TDO2P48775 406 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 PLCD1P51178 756 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 ALX1Q15699 326 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 CST9Q5W186 159 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 NACAP1Q9BZK3 213 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 FZD1Q9UP38 647 aa23.21■■□□□ 1.31
HLA-A-209ENST00000638375 BAZ2AQ9UIF9 1905 aaKnown RBP23.21■■□□□ 1.31
HLA-A-209ENST00000638375 PTH1RQ03431 593 aa23.2■■□□□ 1.3
HLA-A-209ENST00000638375 MIGA2Q7L4E1 593 aa23.2■■□□□ 1.3
HLA-A-209ENST00000638375 DSCC1Q9BVC3 393 aa23.2■■□□□ 1.3
HLA-A-209ENST00000638375 NAPBQ9H115 298 aa23.2■■□□□ 1.3
HLA-A-209ENST00000638375 ARPP21Q9UBL0 812 aaPredicted RBP23.2■■□□□ 1.3
HLA-A-209ENST00000638375 ZMYM6O95789 1325 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 FGAP02671 866 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 HLA-DOAP06340 250 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 NF2P35240 595 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 SBK1Q52WX2 424 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 DNAJC18Q9H819 358 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 PI4KBQ9UBF8 816 aa23.19■■□□□ 1.3
HLA-A-209ENST00000638375 FAM196BA6NMK8 535 aa23.18■■□□□ 1.3
HLA-A-209ENST00000638375 MAP3K10Q02779 954 aa23.18■■□□□ 1.3
HLA-A-209ENST00000638375 PRKG1Q13976 671 aa23.18■■□□□ 1.3
HLA-A-209ENST00000638375 METTL16Q86W50 562 aaKnown RBP23.18■■□□□ 1.3
HLA-A-209ENST00000638375 LSG1Q9H089 658 aaKnown RBP23.18■■□□□ 1.3
HLA-A-209ENST00000638375 EHD4Q9H223 541 aa23.18■■□□□ 1.3
HLA-A-209ENST00000638375 TRPM7Q96QT4 1865 aa23.17■■□□□ 1.3
HLA-A-209ENST00000638375 TBC1D12O60347 775 aa23.17■■□□□ 1.3
HLA-A-209ENST00000638375 DCAF15Q66K64 600 aa23.17■■□□□ 1.3
HLA-A-209ENST00000638375 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms