RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, human

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-229	ENST00000638264	KIF4B	Q2VIQ3	1234 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	TTC6	Q86TZ1	520 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	FAM83A	Q86UY5	434 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	SDR42E1	Q8WUS8	393 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	RNF41	Q9H4P4	317 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	TDRD3	Q9H7E2	651 aa	Known RBP	13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	ZNF287	Q9HBT7	754 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	MCM9	Q9NXL9	1143 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	ZNF70	Q9UC06	446 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	HACL1	Q9UJ83	578 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	FLT1	P17948	1338 aa		13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	COL2A1	P02458	1487 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-229	ENST00000638264	GOLGB1	Q14789	3259 aa	Known RBP	13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	SLC27A2	O14975	620 aa		13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	HMGB1	P09429	215 aa	Known RBP	13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	USP50	Q70EL3	339 aa	Predicted RBP	13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	TM6SF1	Q9BZW5	370 aa		13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	PITPNM2	Q9BZ72	1349 aa		13.85	□□□□□ -0.19
TARDBP-229	ENST00000638264	USP17L12	C9JPN9	530 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	USP17L21	D6R901	530 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	POLR3D	P05423	398 aa	Predicted RBP	13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	CYP21A2	P08686	494 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	PPARA	Q07869	468 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	C12orf60	Q5U649	245 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	CTR9	Q6PD62	1173 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	PNMA8A	Q86V59	439 aa	Predicted RBP	13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	MAPKAPK5	Q8IW41	473 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	ZC3H15	Q8WU90	426 aa	Known RBP	13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	FAM151A	Q8WW52	585 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	CNNM2	Q9H8M5	875 aa		13.84	□□□□□ -0.19
TARDBP-229	ENST00000638264	HLA-DOA	P06340	250 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	EPS15	P42566	896 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	TRDN	Q13061	729 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	SAMD7	Q7Z3H4	446 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	STAG1	Q8WVM7	1258 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	HOOK2	Q96ED9	719 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	EHD4	Q9H223	541 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	PPP2R3B	Q9Y5P8	575 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	SNX14	Q9Y5W7	946 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	ATRNL1	Q5VV63	1379 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	ROBO3	Q96MS0	1386 aa		13.83	□□□□□ -0.2
TARDBP-229	ENST00000638264	FGR	P09769	529 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	EPHX2	P34913	555 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	PDE4B	Q07343	736 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	RABEP1	Q15276	862 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	NBPF9	Q3BBW0	867 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	AKNAD1	Q5T1N1	836 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	RBM26	Q5T8P6	1007 aa	Known RBP	13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	KRT23	Q9C075	422 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	PI4KB	Q9UBF8	816 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	FAM198A	Q9UFP1	575 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	SWAP70	Q9UH65	585 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	PCDHAC2	Q9Y5I4	1007 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	SCN4A	P35499	1836 aa		13.82	□□□□□ -0.2
TARDBP-229	ENST00000638264	WDR90	Q96KV7	1748 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	FOCAD	Q5VW36	1801 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	SHTN1	A0MZ66	631 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	MINDY4B	A8MYZ0	360 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	ORC4	O43929	436 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	NFIA	Q12857	509 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	PICALM	Q13492	652 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	MFSD6	Q6ZSS7	791 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	RASEF	Q8IZ41	740 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	NCOA7	Q8NI08	942 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	MTA3	Q9BTC8	594 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	VEZT	Q9HBM0	779 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	DDX4	Q9NQI0	724 aa	Known RBP	13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	PGAP2	Q9UHJ9	254 aa		13.81	□□□□□ -0.2
TARDBP-229	ENST00000638264	ECM29	Q5VYK3	1845 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	CLRN2	A0PK11	232 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264		E7EWF7	191 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	VEGFA	P15692	232 aa	Predicted RBP	13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	RALYL	Q86SE5	291 aa	Known RBP	13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	METTL16	Q86W50	562 aa	Known RBP	13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	TRPM4	Q8TD43	1214 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	NEK1	Q96PY6	1258 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	ZSWIM6	Q9HCJ5	1215 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	HERC5	Q9UII4	1024 aa	Known RBP	13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	SERPINB13	Q9UIV8	391 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	PALD1	Q9ULE6	856 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	WDR19	Q8NEZ3	1342 aa		13.8	□□□□□ -0.2
TARDBP-229	ENST00000638264	ADAMTSL1	Q8N6G6	1762 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	TCP10L2	B9ZVM9	353 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	TBC1D12	O60347	775 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	EGFR	P00533	1210 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	HAND2	P61296	217 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	TCP10	Q12799	353 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	BLOC1S2	Q6QNY1	142 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	C16orf86	Q6ZW13	317 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	ESR2	Q92731	530 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	DCPS	Q96C86	337 aa	Known RBP	13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	KIF2C	Q99661	725 aa		13.79	□□□□□ -0.2
TARDBP-229	ENST00000638264	TSHZ2	Q9NRE2	1034 aa		13.79	□□□□□ -0.2

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