RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PLS1Q14651 629 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 ANKLE2Q86XL3 938 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 KCNA4P22459 653 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 RGS16O15492 202 aaPredicted RBP14.57□□□□□ -0.08
UBE3A-228ENST00000638155 USP48Q86UV5 1035 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 DHX58Q96C10 678 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 TTF2Q9UNY4 1162 aaKnown RBP14.57□□□□□ -0.08
UBE3A-228ENST00000638155 CEP104O60308 925 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 SKOR1P84550 965 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 RAD51AP2Q09MP3 1159 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 CENPKQ9BS16 269 aa14.57□□□□□ -0.08
UBE3A-228ENST00000638155 RAPGEF2Q9Y4G8 1499 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 ESYT2A0FGR8 921 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 CALML3P27482 149 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 KRT2P35908 639 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 BIRC3Q13489 604 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
UBE3A-228ENST00000638155 RAB17Q9H0T7 212 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 EVI5O60447 810 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 LDHCP07864 332 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 KRT10P13645 584 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 GNAQP50148 359 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 POMGNT1Q8WZA1 660 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 TTLL3Q9Y4R7 772 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 TRIM31Q9BZY9 425 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 KIF21BO75037 1637 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 FNBP1Q96RU3 617 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 KIF11P52732 1056 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 CTAGE3PQ8IX95 158 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
UBE3A-228ENST00000638155 LPXNO60711 386 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.083e-9■■■■□ 26.5
UBE3A-228ENST00000638155 SMTNP53814 917 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 HAND2P61296 217 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CFAP61Q8NHU2 1237 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 MYOM3Q5VTT5 1437 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CASP2P42575 452 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 PPWD1Q96BP3 646 aaKnown RBP14.55□□□□□ -0.08
UBE3A-228ENST00000638155 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
UBE3A-228ENST00000638155 KRT79Q5XKE5 535 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 RNASE9P60153 205 aaKnown RBP14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC105Q8IYK2 499 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 ANKRD35Q8N283 1001 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC138Q96M89 665 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CFAP221Q4G0U5 840 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 COPG1Q9Y678 874 aaKnown RBP14.55□□□□□ -0.08
UBE3A-228ENST00000638155 CLTAP09496 248 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 NONOQ15233 471 aaKnown RBP eCLIP14.55□□□□□ -0.084e-9■■■□□ 18.9
UBE3A-228ENST00000638155 C16orf87Q6PH81 154 aa14.55□□□□□ -0.08
UBE3A-228ENST00000638155 TRIM75PA6NK02 468 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 OAS2P29728 719 aaKnown RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC92Q53HC0 331 aaPredicted RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 FAM8A1Q9UBU6 413 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 ASIC2Q16515 512 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 ESR2Q92731 530 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 VPS37BQ9H9H4 285 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 ZBBXA8MT70 800 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 EEF1B2P24534 225 aaKnown RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.083e-10■■■■■ 28.4
UBE3A-228ENST00000638155 KRT71Q3SY84 523 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 GRAMD4Q6IC98 578 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 TBC1D9Q6ZT07 1266 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 GNGT2O14610 69 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 MYD88Q99836 296 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC159P0C7I6 412 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 TNFAIP3P21580 790 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
UBE3A-228ENST00000638155 RRP36Q96EU6 259 aaKnown RBP14.54□□□□□ -0.08
UBE3A-228ENST00000638155 PFDN6O15212 129 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 SPTLC2O15270 562 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 POLE3Q9NRF9 147 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
UBE3A-228ENST00000638155 OGFOD1Q8N543 542 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 C6orf229H3BNL8 230 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 KLF18A0A0U1RQI7 1052 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 CALUO43852 315 aaPredicted RBP14.53□□□□□ -0.08
UBE3A-228ENST00000638155 FBXO41Q8TF61 875 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 ZNF622Q969S3 477 aaKnown RBP eCLIP14.53□□□□□ -0.081e-10■□□□□ 11.3
UBE3A-228ENST00000638155 SART1O43290 800 aaKnown RBP14.53□□□□□ -0.08
UBE3A-228ENST00000638155 ZGPATQ8N5A5 531 aaKnown RBP14.53□□□□□ -0.08
UBE3A-228ENST00000638155 MAD1L1Q9Y6D9 718 aa14.53□□□□□ -0.08
UBE3A-228ENST00000638155 ALDH1L2Q3SY69 923 aa14.52□□□□□ -0.08
UBE3A-228ENST00000638155 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.08
UBE3A-228ENST00000638155 CCDC8Q9H0W5 538 aaPredicted RBP14.52□□□□□ -0.08
UBE3A-228ENST00000638155 HSPA8P11142 646 aaKnown RBP14.52□□□□□ -0.08
UBE3A-228ENST00000638155 SECISBP2LQ93073 1101 aaKnown RBP14.52□□□□□ -0.08
UBE3A-228ENST00000638155 YY1AP1Q9H869 796 aa14.52□□□□□ -0.08
UBE3A-228ENST00000638155 DACT1Q9NYF0 836 aa14.52□□□□□ -0.08
UBE3A-228ENST00000638155 RSAD2Q8WXG1 361 aa14.52□□□□□ -0.08
UBE3A-228ENST00000638155 SCYL1Q96KG9 808 aa14.52□□□□□ -0.08
UBE3A-228ENST00000638155 NOC4LQ9BVI4 516 aaKnown RBP14.52□□□□□ -0.08
UBE3A-228ENST00000638155 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms