RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 FAM196BA6NMK8 535 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 ENTPD3O75355 529 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 MAP2K2P36507 400 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
CLN6-225ENST00000638144 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.03
CLN6-225ENST00000638144 MAPKAPK5Q8IW41 473 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 WRNIP1Q96S55 665 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 HAUS7Q99871 368 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
CLN6-225ENST00000638144 INPP5BP32019 993 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 GJA5P36382 358 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 VGLL4Q14135 290 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 SLC9C2Q5TAH2 1124 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLN6-225ENST00000638144 TGFBRAP1Q8WUH2 860 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
CLN6-225ENST00000638144 AIDAQ96BJ3 306 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 SLC10A4Q96EP9 437 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 WNK4Q96J92 1243 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 ATRNL1Q5VV63 1379 aa15.2■□□□□ 0.02
CLN6-225ENST00000638144 ZNF532Q9HCE3 1301 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 MYH1P12882 1939 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 NAV1Q8NEY1 1877 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 BAG3O95817 575 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
CLN6-225ENST00000638144 AAMPQ13685 434 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 SPRYD7Q5W111 196 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 ANKRD13AQ8IZ07 590 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 GCC1Q96CN9 775 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
CLN6-225ENST00000638144 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
CLN6-225ENST00000638144 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
CLN6-225ENST00000638144 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
CLN6-225ENST00000638144 FLT1P17948 1338 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 MX1P20591 662 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 PPP4CP60510 307 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 MAP3K9P80192 1104 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 ZNF341Q9BYN7 854 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CLN6-225ENST00000638144 CSADQ9Y600 493 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 SNCAIPQ9Y6H5 919 aa15.18■□□□□ 0.02
CLN6-225ENST00000638144 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 PLCG2P16885 1265 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 PI4K2BQ8TCG2 481 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 OPTNQ96CV9 577 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 OTUD5Q96G74 571 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
CLN6-225ENST00000638144 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
CLN6-225ENST00000638144 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
CLN6-225ENST00000638144 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
CLN6-225ENST00000638144 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 MAGEB6P1A0A0J9YX57 407 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
CLN6-225ENST00000638144 LBX1P52954 281 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 LAMB1P07942 1786 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 TTC41PQ6P2S7 1318 aa15.16■□□□□ 0.02
CLN6-225ENST00000638144 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
CLN6-225ENST00000638144 CASP8AP2Q9UKL3 1982 aa15.15■□□□□ 0.02
CLN6-225ENST00000638144 TRPA1O75762 1119 aa15.15■□□□□ 0.02
CLN6-225ENST00000638144 MBD4O95243 580 aa15.15■□□□□ 0.02
CLN6-225ENST00000638144 ADD2P35612 726 aa15.15■□□□□ 0.02
CLN6-225ENST00000638144 USP5P45974 858 aa15.15■□□□□ 0.02
CLN6-225ENST00000638144 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
CLN6-225ENST00000638144 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
CLN6-225ENST00000638144 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
CLN6-225ENST00000638144 CTCFP49711 727 aaPredicted RBP15.14■□□□□ 0.01
CLN6-225ENST00000638144 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
CLN6-225ENST00000638144 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
CLN6-225ENST00000638144 RNF186Q9NXI6 227 aa15.14■□□□□ 0.01
CLN6-225ENST00000638144 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
CLN6-225ENST00000638144 SPDYE5A6NIY4 337 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 ERC2O15083 957 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 PRKAB2O43741 272 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 IGSF3O75054 1194 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 GLRX3O76003 335 aaKnown RBP15.13■□□□□ 0.01
CLN6-225ENST00000638144 ZBTB48P10074 688 aaPredicted RBP15.13■□□□□ 0.01
CLN6-225ENST00000638144 PDE1AP54750 535 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 EVX2Q03828 476 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 RRP1BQ14684 758 aaKnown RBP15.13■□□□□ 0.01
CLN6-225ENST00000638144 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
CLN6-225ENST00000638144 COL13A1Q5TAT6 717 aaPredicted RBP15.13■□□□□ 0.01
CLN6-225ENST00000638144 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
CLN6-225ENST00000638144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLN6-225ENST00000638144 IGF2BP3O00425 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLN6-225ENST00000638144 NUCB1Q02818 461 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms