RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CBX8Q9HC52 389 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 TAOK2Q9UL54 1235 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 MINDY4BA8MYZ0 360 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 CTAGE5O15320 804 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 YEATS4O95619 227 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 SF3A1Q15459 793 aaKnown RBP25.02■■□□□ 1.6
CLN6-224ENST00000638076 KRT40Q6A162 431 aa25.02■■□□□ 1.6
CLN6-224ENST00000638076 KINO60870 393 aaKnown RBP25.01■■□□□ 1.59
CLN6-224ENST00000638076 WTAPQ15007 396 aa25.01■■□□□ 1.59
CLN6-224ENST00000638076 KCNG4Q8TDN1 519 aa25.01■■□□□ 1.59
CLN6-224ENST00000638076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.01■■□□□ 1.59
CLN6-224ENST00000638076 CACNA1SQ13698 1873 aa25.01■■□□□ 1.59
CLN6-224ENST00000638076 DYNLL1P63167 89 aaKnown RBP25.01■■□□□ 1.59
CLN6-224ENST00000638076 MRPS27Q92552 414 aaKnown RBP25.01■■□□□ 1.59
CLN6-224ENST00000638076 NAP1L5Q96NT1 182 aaPredicted RBP25.01■■□□□ 1.59
CLN6-224ENST00000638076 ANKRD2Q9GZV1 360 aa25.01■■□□□ 1.59
CLN6-224ENST00000638076 ERICH2A1L162 156 aa25■■□□□ 1.59
CLN6-224ENST00000638076 SEMA3EO15041 775 aa25■■□□□ 1.59
CLN6-224ENST00000638076 SPTLC2O15270 562 aa25■■□□□ 1.59
CLN6-224ENST00000638076 ZNF384Q8TF68 577 aa25■■□□□ 1.59
CLN6-224ENST00000638076 DNAJC25Q9H1X3 360 aa25■■□□□ 1.59
CLN6-224ENST00000638076 TFCP2L1Q9NZI6 479 aa25■■□□□ 1.59
CLN6-224ENST00000638076 NPHP1O15259 732 aa25■■□□□ 1.59
CLN6-224ENST00000638076 GJD4Q96KN9 370 aaPredicted RBP25■■□□□ 1.59
CLN6-224ENST00000638076 SLC26A6Q9BXS9 759 aa25■■□□□ 1.59
CLN6-224ENST00000638076 ZBTB4Q9P1Z0 1013 aaPredicted RBP25■■□□□ 1.59
CLN6-224ENST00000638076 A0A1W2PQ27 194 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 A0A1W2PQ64 194 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 A0A1W2PQD8 194 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 TM4SF1P30408 202 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 ANO1Q5XXA6 986 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 MTA3Q9BTC8 594 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 ANAPC4Q9UJX5 808 aa24.99■■□□□ 1.59
CLN6-224ENST00000638076 HIBADHP31937 336 aaKnown RBP24.98■■□□□ 1.59
CLN6-224ENST00000638076 RFC4P35249 363 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 SSRP1Q08945 709 aaKnown RBP24.98■■□□□ 1.59
CLN6-224ENST00000638076 NID2Q14112 1375 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 A0A1B0GVL5 298 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 UBE2Q2LH0YL09 131 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 SMIM22K7EJ46 135 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 ZNF165P49910 485 aa24.98■■□□□ 1.59
CLN6-224ENST00000638076 GNL2Q13823 731 aaKnown RBP24.97■■□□□ 1.59
CLN6-224ENST00000638076 TRIM29Q14134 588 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 TRAPPC3LQ5T215 181 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 FMR1NBQ8N0W7 255 aaPredicted RBP24.97■■□□□ 1.59
CLN6-224ENST00000638076 TMTC2Q8N394 836 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 NSUN4Q96CB9 384 aaKnown RBP24.97■■□□□ 1.59
CLN6-224ENST00000638076 STK36Q9NRP7 1315 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 FMNL1O95466 1100 aaPredicted RBP24.97■■□□□ 1.59
CLN6-224ENST00000638076 IFNAR1P17181 557 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
CLN6-224ENST00000638076 UBAC1Q9BSL1 405 aa24.97■■□□□ 1.59
CLN6-224ENST00000638076 RTN1Q16799 776 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 ESR2Q92731 530 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 ZNF830Q96NB3 372 aaPredicted RBP24.96■■□□□ 1.59
CLN6-224ENST00000638076 BRIP1Q9BX63 1249 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.96■■□□□ 1.59
CLN6-224ENST00000638076 OFD1O75665 1012 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 NDUFA8P51970 172 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 TAF1LQ8IZX4 1826 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 LY75O60449 1722 aa24.96■■□□□ 1.59
CLN6-224ENST00000638076 PDS5AQ29RF7 1337 aaKnown RBP24.95■■□□□ 1.59
CLN6-224ENST00000638076 CAVIN2O95810 425 aa24.95■■□□□ 1.58
CLN6-224ENST00000638076 MECOMQ03112 1051 aa24.95■■□□□ 1.58
CLN6-224ENST00000638076 FAM196AQ6ZSG2 479 aa24.95■■□□□ 1.58
CLN6-224ENST00000638076 ECM29Q5VYK3 1845 aa24.95■■□□□ 1.58
CLN6-224ENST00000638076 CYP2D7A0A087X1C5 515 aa24.95■■□□□ 1.58
CLN6-224ENST00000638076 CHAF1AQ13111 956 aaPredicted RBP24.95■■□□□ 1.58
CLN6-224ENST00000638076 TXNRD3Q86VQ6 643 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 ZNF654Q8IZM8 581 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 TDRD7Q8NHU6 1098 aaKnown RBP24.94■■□□□ 1.58
CLN6-224ENST00000638076 WASF1Q92558 559 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 U2AF2P26368 475 aaKnown RBP eCLIP24.94■■□□□ 1.58
CLN6-224ENST00000638076 GUCY1A2P33402 732 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 STX1AQ16623 288 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 NUP133Q8WUM0 1156 aa24.94■■□□□ 1.58
CLN6-224ENST00000638076 TNKSO95271 1327 aa24.93■■□□□ 1.58
CLN6-224ENST00000638076 SLC39A14Q15043 492 aa24.93■■□□□ 1.58
CLN6-224ENST00000638076 AXDND1Q5T1B0 1012 aaPredicted RBP24.93■■□□□ 1.58
CLN6-224ENST00000638076 TTC12Q9H892 705 aaPredicted RBP24.93■■□□□ 1.58
CLN6-224ENST00000638076 PRDX5P30044 214 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 NFIXQ14938 502 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 SEC23AQ15436 765 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.92■■□□□ 1.58
CLN6-224ENST00000638076 C11orf57Q6ZUT1 292 aaPredicted RBP24.92■■□□□ 1.58
CLN6-224ENST00000638076 TRIM22Q8IYM9 498 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 CCDC82Q8N4S0 544 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 FANCBQ8NB91 859 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 SDF4Q9BRK5 362 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.92■■□□□ 1.58
CLN6-224ENST00000638076 CCDC196A0A1B0GTZ2 297 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 MARCKSP29966 332 aaPredicted RBP24.92■■□□□ 1.58
CLN6-224ENST00000638076 RCAN1P53805 252 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 CTR9Q6PD62 1173 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 CMTR1Q8N1G2 835 aaKnown RBP24.92■■□□□ 1.58
CLN6-224ENST00000638076 SPC24Q8NBT2 197 aa24.92■■□□□ 1.58
CLN6-224ENST00000638076 AATFQ9NY61 560 aaKnown RBP eCLIP24.92■■□□□ 1.58
CLN6-224ENST00000638076 TNRC6CQ9HCJ0 1690 aaKnown RBP24.92■■□□□ 1.58
CLN6-224ENST00000638076 ERCC4Q92889 916 aaPredicted RBP24.91■■□□□ 1.58
CLN6-224ENST00000638076 JAG2Q9Y219 1238 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms