RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TESPA1A2RU30 521 aaPredicted RBP21.75■■□□□ 1.07
PNKP-230ENST00000638016 IRF6O14896 467 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 INHBEP58166 350 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 CRHR2Q13324 411 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 CCL15Q16663 113 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 ADGRA1Q86SQ6 560 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 SLF2Q8IX21 1173 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
PNKP-230ENST00000638016 ENTPD3O75355 529 aa21.74■■□□□ 1.07
PNKP-230ENST00000638016 AACSQ86V21 672 aa21.74■■□□□ 1.07
PNKP-230ENST00000638016 ZSCAN29Q8IWY8 852 aaPredicted RBP21.74■■□□□ 1.07
PNKP-230ENST00000638016 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
PNKP-230ENST00000638016 HOOK2Q96ED9 719 aa21.74■■□□□ 1.07
PNKP-230ENST00000638016 ZNF112Q9UJU3 913 aa21.74■■□□□ 1.07
PNKP-230ENST00000638016 ALDH1A1P00352 501 aa21.73■■□□□ 1.07
PNKP-230ENST00000638016 ERO1BQ86YB8 467 aa21.73■■□□□ 1.07
PNKP-230ENST00000638016 RHPN1Q8TCX5 695 aa21.73■■□□□ 1.07
PNKP-230ENST00000638016 SH3RF3Q8TEJ3 882 aaPredicted RBP21.73■■□□□ 1.07
PNKP-230ENST00000638016 CDK5RAP2Q96SN8 1893 aa21.73■■□□□ 1.07
PNKP-230ENST00000638016 FAM196BA6NMK8 535 aa21.72■■□□□ 1.07
PNKP-230ENST00000638016 FKTNO75072 461 aa21.72■■□□□ 1.07
PNKP-230ENST00000638016 CAP1Q01518 475 aa21.72■■□□□ 1.07
PNKP-230ENST00000638016 ZNF512BQ96KM6 892 aaPredicted RBP21.72■■□□□ 1.07
PNKP-230ENST00000638016 ANTXR1Q9H6X2 564 aa21.72■■□□□ 1.07
PNKP-230ENST00000638016 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.72■■□□□ 1.07
PNKP-230ENST00000638016 PHF20L1A8MW92 1017 aa21.71■■□□□ 1.07
PNKP-230ENST00000638016 GTF2A2P52657 109 aa21.71■■□□□ 1.07
PNKP-230ENST00000638016 GSTO1P78417 241 aa21.71■■□□□ 1.07
PNKP-230ENST00000638016 NAA16Q6N069 864 aaPredicted RBP21.71■■□□□ 1.07
PNKP-230ENST00000638016 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
PNKP-230ENST00000638016 AATFQ9NY61 560 aaKnown RBP eCLIP21.71■■□□□ 1.07
PNKP-230ENST00000638016 LDHCP07864 332 aa21.7■■□□□ 1.06
PNKP-230ENST00000638016 PPIL2Q13356 520 aa21.7■■□□□ 1.06
PNKP-230ENST00000638016 NOM1Q5C9Z4 860 aaKnown RBP21.7■■□□□ 1.06
PNKP-230ENST00000638016 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
PNKP-230ENST00000638016 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
PNKP-230ENST00000638016 SIPA1L1O43166 1804 aa21.7■■□□□ 1.06
PNKP-230ENST00000638016 ZSWIM8A7E2V4 1837 aa21.69■■□□□ 1.06
PNKP-230ENST00000638016 BTBD19C9JJ37 291 aa21.69■■□□□ 1.06
PNKP-230ENST00000638016 NOL9Q5SY16 702 aaKnown RBP21.69■■□□□ 1.06
PNKP-230ENST00000638016 CCDC84Q86UT8 332 aaPredicted RBP21.69■■□□□ 1.06
PNKP-230ENST00000638016 TEX11Q8IYF3 940 aa21.69■■□□□ 1.06
PNKP-230ENST00000638016 DOCK1Q14185 1865 aa21.69■■□□□ 1.06
PNKP-230ENST00000638016 PDE3AQ14432 1141 aa21.68■■□□□ 1.06
PNKP-230ENST00000638016 TAF1CQ15572 869 aaPredicted RBP21.68■■□□□ 1.06
PNKP-230ENST00000638016 OTUD7BQ6GQQ9 843 aa21.68■■□□□ 1.06
PNKP-230ENST00000638016 OSBPL5Q9H0X9 879 aaPredicted RBP21.68■■□□□ 1.06
PNKP-230ENST00000638016 FOCADQ5VW36 1801 aa21.67■■□□□ 1.06
PNKP-230ENST00000638016 IDH1O75874 414 aaKnown RBP21.67■■□□□ 1.06
PNKP-230ENST00000638016 DYNLL1P63167 89 aaKnown RBP21.67■■□□□ 1.06
PNKP-230ENST00000638016 PPATQ06203 517 aa21.67■■□□□ 1.06
PNKP-230ENST00000638016 SNAPC2Q13487 334 aa21.67■■□□□ 1.06
PNKP-230ENST00000638016 CD99L2Q8TCZ2 262 aa21.67■■□□□ 1.06
PNKP-230ENST00000638016 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
PNKP-230ENST00000638016 HPS5Q9UPZ3 1129 aa21.67■■□□□ 1.06
PNKP-230ENST00000638016 HTTP42858 3142 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 PHIPQ8WWQ0 1821 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 HMMRO75330 724 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 CETPP11597 493 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 MAP3K10Q02779 954 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 MOGSQ13724 837 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 SCYL3Q8IZE3 742 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 KIF1BPQ96EK5 621 aa21.66■■□□□ 1.06
PNKP-230ENST00000638016 PTPRFP10586 1907 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 CYP7A1P22680 504 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 RRP1BQ14684 758 aaKnown RBP21.65■■□□□ 1.06
PNKP-230ENST00000638016 MIGA1Q8NAN2 632 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 TGFBRAP1Q8WUH2 860 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 KCNH4Q9UQ05 1017 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
PNKP-230ENST00000638016 ATAD5Q96QE3 1844 aa21.64■■□□□ 1.06
PNKP-230ENST00000638016 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.05
PNKP-230ENST00000638016 SOX10P56693 466 aa21.64■■□□□ 1.05
PNKP-230ENST00000638016 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.05
PNKP-230ENST00000638016 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
PNKP-230ENST00000638016 CLASRPQ8N2M8 674 aaKnown RBP21.64■■□□□ 1.05
PNKP-230ENST00000638016 MAGEB6Q8N7X4 407 aa21.64■■□□□ 1.05
PNKP-230ENST00000638016 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
PNKP-230ENST00000638016 COL2A1P02458 1487 aaPredicted RBP21.64■■□□□ 1.05
PNKP-230ENST00000638016 SMARCA5O60264 1052 aaPredicted RBP21.63■■□□□ 1.05
PNKP-230ENST00000638016 ECM2O94769 699 aaPredicted RBP21.63■■□□□ 1.05
PNKP-230ENST00000638016 PTPRAP18433 802 aa21.63■■□□□ 1.05
PNKP-230ENST00000638016 PPP4CP60510 307 aa21.63■■□□□ 1.05
PNKP-230ENST00000638016 NOL10Q9BSC4 688 aaKnown RBP21.63■■□□□ 1.05
PNKP-230ENST00000638016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.63■■□□□ 1.05
PNKP-230ENST00000638016 ZFYVE28Q9HCC9 887 aa21.63■■□□□ 1.05
PNKP-230ENST00000638016 ZHX2Q9Y6X8 837 aa21.63■■□□□ 1.05
PNKP-230ENST00000638016 FLT1P17948 1338 aa21.62■■□□□ 1.05
PNKP-230ENST00000638016 BAG3O95817 575 aa21.62■■□□□ 1.05
PNKP-230ENST00000638016 SP3Q02447 781 aa21.62■■□□□ 1.05
PNKP-230ENST00000638016 PICK1Q9NRD5 415 aa21.62■■□□□ 1.05
PNKP-230ENST00000638016 SAP30BPQ9UHR5 308 aaKnown RBP21.62■■□□□ 1.05
PNKP-230ENST00000638016 MAP4K4O95819 1239 aaPredicted RBP21.61■■□□□ 1.05
PNKP-230ENST00000638016 IFIT2P09913 472 aaKnown RBP21.61■■□□□ 1.05
PNKP-230ENST00000638016 SHROOM1Q2M3G4 852 aaPredicted RBP21.61■■□□□ 1.05
PNKP-230ENST00000638016 FBXO46Q6PJ61 603 aaPredicted RBP21.61■■□□□ 1.05
PNKP-230ENST00000638016 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
PNKP-230ENST00000638016 DNAJC18Q9H819 358 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms