RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 APLFQ8IW19 511 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-211ENST00000637881 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 THOC1Q96FV9 657 aaKnown RBP8.98□□□□□ -0.97
CDKL5-211ENST00000637881 RSRC1Q96IZ7 334 aaKnown RBP8.98□□□□□ -0.97
CDKL5-211ENST00000637881 VCPKMTQ9H867 229 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 SH2B1Q9NRF2 756 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-211ENST00000637881 LIMCH1Q9UPQ0 1083 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 ATP10DQ9P241 1426 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 COL18A1P39060 1754 aa8.98□□□□□ -0.97
CDKL5-211ENST00000637881 COL3A1P02461 1466 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 GOLGA6L4A6NEF3 574 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 MEFVO15553 781 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 ZEB2O60315 1214 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 AP1G2O75843 785 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 RASSF9O75901 435 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 RTN3O95197 1032 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 CCT5P48643 541 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 SNCBQ16143 134 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 AMOTQ4VCS5 1084 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 ARMCX5Q6P1M9 558 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 RPAP2Q8IXW5 612 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 CKAP2LQ8IYA6 745 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 CEP57L1Q8IYX8 460 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 SMARCC1Q92922 1105 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 ACTR5Q9H9F9 607 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-211ENST00000637881 CD248Q9HCU0 757 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 PCDHGA4Q9Y5G9 962 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 PLCH1Q4KWH8 1693 aa8.97□□□□□ -0.97
CDKL5-211ENST00000637881 EME2A4GXA9 379 aaPredicted RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 PDCP20941 246 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 CHMP4BP1P59074 171 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 ZRSR2Q15696 482 aaKnown RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 DDB1Q16531 1140 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 TPRNQ4KMQ1 711 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 TTLL7Q6ZT98 887 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 NBPF15Q8N660 670 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 ZCRB1Q8TBF4 217 aaKnown RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 TSR2Q969E8 191 aaKnown RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 TTC14Q96N46 770 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 API5Q9BZZ5 524 aaKnown RBP8.96□□□□□ -0.97
CDKL5-211ENST00000637881 ANKZF1Q9H8Y5 726 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 KIF9Q9HAQ2 790 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 LMO7Q8WWI1 1683 aa8.96□□□□□ -0.97
CDKL5-211ENST00000637881 GOLGA6L7A0A1B0GV03 622 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 SRRM3A6NNA2 597 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 EIF3HO15372 352 aaKnown RBP eCLIP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 MYO1BO43795 1136 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 N4BP1O75113 896 aaKnown RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 CDR1P51861 262 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 MTHFSDQ2M296 383 aaKnown RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 WDR93Q6P2C0 686 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 ZNF530Q6P9A1 599 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 RINLQ6ZS11 566 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 DHX40Q8IX18 779 aaKnown RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 FAM76AQ8TAV0 307 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 PARD3BQ8TEW8 1205 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 CLIC6Q96NY7 704 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 PALD1Q9ULE6 856 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 THRAP3Q9Y2W1 955 aaKnown RBP8.96□□□□□ -0.98
CDKL5-211ENST00000637881 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
CDKL5-211ENST00000637881 ERICH2A1L162 156 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 ARHGAP6O43182 974 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 CUTAO60888 179 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 HSPA4P34932 840 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 IRAK1P51617 712 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 ACTN3Q08043 901 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-211ENST00000637881 G3BP1Q13283 466 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDKL5-211ENST00000637881 NAA25Q14CX7 972 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 CAMK4Q16566 473 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 CCDC38Q502W7 563 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 CCDC170Q8IYT3 715 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 LEO1Q8WVC0 666 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-211ENST00000637881 DTNBP1Q96EV8 351 aa8.95□□□□□ -0.98
CDKL5-211ENST00000637881 DDX20Q9UHI6 824 aaKnown RBP8.95□□□□□ -0.98
CDKL5-211ENST00000637881 AOX1Q06278 1338 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 VWA3AA6NCI4 1184 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 SASH1O94885 1247 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 GCLCP48506 637 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 CCDC40Q4G0X9 1142 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 SPATA21Q7Z572 469 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 MRPL50Q8N5N7 158 aaKnown RBP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 C3orf20Q8ND61 904 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 ZFAND2BQ8WV99 257 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
CDKL5-211ENST00000637881 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 CCDC47Q96A33 483 aaKnown RBP8.94□□□□□ -0.98
CDKL5-211ENST00000637881 PLEKHG4BQ96PX9 1271 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms